RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 FAM189A2Q15884 450 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 HIST3H3Q16695 136 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 PMS2CLQ68D20 193 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 C1QL2Q7Z5L3 287 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 SEMA6DQ8NFY4 1073 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 HPSE2Q8WWQ2 592 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 PECRQ9BY49 303 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 TNRC18O15417 2968 aaPredicted RBP16.51■□□□□ 0.23
SNX4-201ENST00000251775 CRYM-AS1A6NIL9 109 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 AQP7P3A6NL99 342 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 E5RGE8 158 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 PRH1P02810 166 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 FGF5P12034 268 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 SULF2Q8IWU5 870 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 OR5D18Q8NGL1 313 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 IFI44Q8TCB0 444 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 NSG2Q9Y328 171 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 BORCS7-ASMTA0A0B4J1R7 106 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 BLVRBP30043 206 aaPredicted RBP16.51■□□□□ 0.23
SNX4-201ENST00000251775 PPP1CCP36873 323 aaKnown RBP16.51■□□□□ 0.23
SNX4-201ENST00000251775 RPS10P46783 165 aaKnown RBP16.51■□□□□ 0.23
SNX4-201ENST00000251775 NAT6Q93015 286 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 MR1Q95460 341 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 MUCL1Q96DR8 90 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 ZNF2Q9BSG1 426 aaPredicted RBP16.51■□□□□ 0.23
SNX4-201ENST00000251775 PBDC1Q9BVG4 233 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 MOB1AQ9H8S9 216 aa16.51■□□□□ 0.23
SNX4-201ENST00000251775 PUS1Q9Y606 427 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNX4-201ENST00000251775 LOC102723996A0A087X1L8 192 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 CTSDP07339 412 aaPredicted RBP16.5■□□□□ 0.23
SNX4-201ENST00000251775 ITGA3P26006 1051 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 CRIP3Q6Q6R5 217 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 ZNF383Q8NA42 475 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 STRAPQ9Y3F4 350 aaKnown RBP16.5■□□□□ 0.23
SNX4-201ENST00000251775 A0A1B0GV50 99 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 ZNF726A6NNF4 738 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 DHRS7CA6NNS2 312 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 TP53I11O14683 189 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 LY86O95711 162 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 OPA3Q9H6K4 179 aa16.5■□□□□ 0.23
SNX4-201ENST00000251775 ZNF701Q9NV72 531 aaPredicted RBP16.5■□□□□ 0.23
SNX4-201ENST00000251775 UMODP07911 640 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 CHATP28329 748 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 NDUFA6P56556 154 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 CLDN17P56750 224 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 DEFA6Q01524 100 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 KCNMB1Q16558 191 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 MARS2Q96GW9 593 aaKnown RBP16.49■□□□□ 0.23
SNX4-201ENST00000251775 RARRES2Q99969 163 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 WDR54Q9H977 334 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 ZDHHC8Q9ULC8 765 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 MMP24Q9Y5R2 645 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 IGHV1-45A0A0A0MS14 117 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 XRCC2O43543 280 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 GPR137BO60478 399 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 SOHLH1Q5JUK2 328 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 SLAMF9Q96A28 289 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 DOK5Q9P104 306 aa16.49■□□□□ 0.23
SNX4-201ENST00000251775 LOC102725191A0A1B0GVB3 256 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 A0A1B0GW64 132 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 C5orf63A6NC05 138 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 E9PLN8 166 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 CFIP05156 583 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 PLXDC2Q6UX71 529 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 FAM57BQ71RH2 274 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 RTTNQ86VV8 2226 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 HSD17B11Q8NBQ5 300 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 IMMP1LQ96LU5 166 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 GAR1Q9NY12 217 aaKnown RBP16.48■□□□□ 0.23
SNX4-201ENST00000251775 MCTS1Q9ULC4 181 aaKnown RBP16.48■□□□□ 0.23
SNX4-201ENST00000251775 SERPINE3A8MV23 424 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 DIRAS3O95661 229 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 CYC1P08574 325 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 FOSL1P15407 271 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 S100A2P29034 98 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 ECI1P42126 302 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 IL11RAQ14626 422 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 SUMF2Q8NBJ7 301 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 MAFAQ8NHW3 353 aaPredicted RBP16.48■□□□□ 0.23
SNX4-201ENST00000251775 PARPBPQ9NWS1 579 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 PTRH2Q9Y3E5 179 aaKnown RBP16.48■□□□□ 0.23
SNX4-201ENST00000251775 SDK2Q58EX2 2172 aa16.48■□□□□ 0.23
SNX4-201ENST00000251775 CCL3P10147 92 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 CCL4P13236 92 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 SERPINA2P20848 420 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 CCL1P22362 96 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 KISS1Q15726 138 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 SP6Q3SY56 376 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 PHYHD1Q5SRE7 291 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 DBX2Q6ZNG2 339 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 LRRC18Q8N456 261 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 ZNF283Q8N7M2 679 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 FAM213BQ8TBF2 198 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 S100A13Q99584 98 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 PRDM13Q9H4Q3 707 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 DECR2Q9NUI1 292 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 NXT1Q9UKK6 140 aaKnown RBP16.47■□□□□ 0.23
SNX4-201ENST00000251775 PADI1Q9ULC6 663 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 ZNF727A8MUV8 499 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 K7N7A8 449 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms