RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TRGV5A0A0B4J1U4 118 aa18.69■□□□□ 0.58
CLN6-201ENST00000249806 RRP8O43159 456 aaKnown RBP18.69■□□□□ 0.58
CLN6-201ENST00000249806 OR5H8P0DN80 308 aa18.69■□□□□ 0.58
CLN6-201ENST00000249806 DAZAP2Q15038 168 aaPredicted RBP18.69■□□□□ 0.58
CLN6-201ENST00000249806 HIKESHIQ53FT3 197 aa18.69■□□□□ 0.58
CLN6-201ENST00000249806 RELL2Q8NC24 303 aaPredicted RBP18.69■□□□□ 0.58
CLN6-201ENST00000249806 TECTBQ96PL2 329 aa18.69■□□□□ 0.58
CLN6-201ENST00000249806 NMES1Q9C002 83 aa18.69■□□□□ 0.58
CLN6-201ENST00000249806 EDARQ9UNE0 448 aa18.69■□□□□ 0.58
CLN6-201ENST00000249806 KANTRA0A1W2PQU2 76 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 TEX46H3BTG2 121 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 PRDX4Q13162 271 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 FAM219AQ8IW50 185 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 OR5M9Q8NGP3 310 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 MRPS24Q96EL2 167 aaKnown RBP18.68■□□□□ 0.58
CLN6-201ENST00000249806 POM121L2Q96KW2 1035 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 RAB18Q9NP72 206 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 FTH1P19P0C7X4 201 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 COX5BP10606 129 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 PTGER4P35408 488 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 SURF2Q15527 256 aaPredicted RBP18.68■□□□□ 0.58
CLN6-201ENST00000249806 MRPL21Q7Z2W9 205 aaKnown RBP18.68■□□□□ 0.58
CLN6-201ENST00000249806 GLRX5Q86SX6 157 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 CCDC28AQ8IWP9 274 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 BHLHE23Q8NDY6 225 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 APOBEC3DQ96AK3 386 aaPredicted RBP18.68■□□□□ 0.58
CLN6-201ENST00000249806 MARS2Q96GW9 593 aaKnown RBP18.68■□□□□ 0.58
CLN6-201ENST00000249806 OR10C1Q96KK4 312 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 ZNF75AQ96N20 296 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 RNF126Q9BV68 326 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 REG4Q9BYZ8 158 aa18.68■□□□□ 0.58
CLN6-201ENST00000249806 METTL8Q9H825 291 aaKnown RBP18.68■□□□□ 0.58
CLN6-201ENST00000249806 C14orf166Q9Y224 244 aaKnown RBP18.68■□□□□ 0.58
CLN6-201ENST00000249806 SHANK1Q9Y566 2161 aa18.67■□□□□ 0.58
CLN6-201ENST00000249806 IL18BPO95998 194 aa18.67■□□□□ 0.58
CLN6-201ENST00000249806 ARR3P36575 388 aa18.67■□□□□ 0.58
CLN6-201ENST00000249806 GPM6AP51674 278 aa18.67■□□□□ 0.58
CLN6-201ENST00000249806 LUMP51884 338 aaPredicted RBP18.67■□□□□ 0.58
CLN6-201ENST00000249806 RBM11P57052 281 aaKnown RBP18.67■□□□□ 0.58
CLN6-201ENST00000249806 HPSE2Q8WWQ2 592 aa18.67■□□□□ 0.58
CLN6-201ENST00000249806 RBPMSQ93062 196 aaKnown RBP18.67■□□□□ 0.58
CLN6-201ENST00000249806 LAMA5O15230 3695 aa18.67■□□□□ 0.58
CLN6-201ENST00000249806 hCG_1807616A0A1W2PRN6 198 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 CDRT15L2A8MXV6 281 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 H0YIZ8 118 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 HAAOP46952 286 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 MALLQ13021 153 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 INO80EQ8NBZ0 244 aaPredicted RBP18.66■□□□□ 0.58
CLN6-201ENST00000249806 MARVELD3Q96A59 401 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 SLX1AQ9BQ83 275 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 OR51B6Q9H340 312 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 A0A0B4J2A0 478 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 PQLC2LA1A4F0 135 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 BCL2L11O43521 198 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 OR7C1O76099 320 aaPredicted RBP18.66■□□□□ 0.58
CLN6-201ENST00000249806 HOXB5P09067 269 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 DTYMKP23919 212 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 CCL11P51671 97 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 FAM74A1Q5RGS3 127 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 NSUN5P2Q63ZY6 315 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 Q6ZPA2 131 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 HS3ST6Q96QI5 342 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 ZNF471Q9BX82 626 aaPredicted RBP18.66■□□□□ 0.58
CLN6-201ENST00000249806 SDHAF2Q9NX18 166 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 SHPKQ9UHJ6 478 aa18.66■□□□□ 0.58
CLN6-201ENST00000249806 SLC22A20A6NK97 555 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 F8VVB4 439 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 F8VWA3 439 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 PDCD6O75340 191 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 SPINK2P20155 84 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 TNFSF10P50591 281 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 UBA52P62987 128 aaKnown RBP18.65■□□□□ 0.58
CLN6-201ENST00000249806 CYCSP99999 105 aaKnown RBP18.65■□□□□ 0.58
CLN6-201ENST00000249806 PLP2Q04941 152 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 TMEM178AQ8NBL3 297 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 DCUN1D4Q92564 292 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 SLAMF9Q96A28 289 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 ZDHHC11Q9H8X9 412 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 NECAP2Q9NVZ3 263 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 SS18L1O75177 396 aaPredicted RBP18.65■□□□□ 0.58
CLN6-201ENST00000249806 BCL3P20749 454 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 OR1S1Q8NH92 325 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 DECR2Q9NUI1 292 aa18.65■□□□□ 0.58
CLN6-201ENST00000249806 TNRC6AQ8NDV7 1962 aaKnown RBP18.64■□□□□ 0.57
CLN6-201ENST00000249806 WISP2O76076 250 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 SOX8P57073 446 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 SLC22A25Q6T423 547 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 DHRS11Q6UWP2 260 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 TOMM40LQ969M1 308 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 RRNAD1Q96FB5 475 aaKnown RBP18.64■□□□□ 0.57
CLN6-201ENST00000249806 ZNF442Q9H7R0 627 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 PCDHB16Q9NRJ7 776 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 MFSD2BA6NFX1 497 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 SHOXO15266 292 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 IFNA2P01563 188 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 FUT3P21217 361 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 WNT5AP41221 380 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 CEACAM21Q3KPI0 293 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 FBXW9Q5XUX1 488 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 UNQ6126/PRO20091Q6UXV3 157 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms