RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 COQ3Q9NZJ6 369 aa14.62□□□□□ -0.07
CDKN1A-201ENST00000244741 USP9XQ93008 2570 aaPredicted RBP14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 hCG_1807616A0A1W2PRN6 198 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 C9orf170A2RU37 121 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 F5H5K5 113 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 CNOT4O95628 575 aaKnown RBP14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 CST2P09228 141 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 PSG4Q00888 419 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 GK2Q14410 553 aaPredicted RBP14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 RSPO1Q2MKA7 263 aaPredicted RBP14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 MRGPRGQ86SM5 289 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 OR4K15Q8NH41 348 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 S100PBPQ96BU1 408 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 PIGMQ9H3S5 423 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 ERRFI1Q9UJM3 462 aaPredicted RBP14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 SPTAN1Q13813 2472 aaKnown RBP14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 ZSCAN5BA6NJL1 495 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 CRTAPO75718 401 aaPredicted RBP14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 IFNA6P05013 189 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 DBHP09172 617 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 CCL2P13500 99 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 HIST1H1DP16402 221 aaKnown RBP14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 CRIP3Q6Q6R5 217 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 C22orf34Q6ZV56 151 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 GJC3Q8NFK1 279 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 SUN5Q8TC36 379 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 C17orf50Q8WW18 174 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 TMEM59Q9BXS4 323 aa14.61□□□□□ -0.07
CDKN1A-201ENST00000244741 IGLV3-1P01715 115 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 GSTP1P09211 210 aaKnown RBP14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 MMP7P09237 267 aaPredicted RBP14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 IL32P24001 234 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 GRNP28799 593 aaKnown RBP14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 CHRNB4P30926 498 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 RAB1AP62820 205 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 IL13RA1P78552 427 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 P2RY6Q15077 328 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 MICBQ29980 383 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 C4orf17Q53FE4 359 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 PABPC1L2AQ5JQF8 200 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 LPCAT3Q6P1A2 487 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 C1QL2Q7Z5L3 287 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 NPRL2Q8WTW4 380 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 CA5BP1Q8WTZ4 195 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 MITD1Q8WV92 249 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 SDHAF2Q9NX18 166 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 SGCEO43556 437 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 AKR1C4P17516 323 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 TBPP20226 339 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 SLC6A9P48067 706 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 UBE2NP61088 152 aaKnown RBP14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 HIST1H3AP68431 136 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 HIST2H3PS2Q5TEC6 136 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 TMEM65Q6PI78 240 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 HIST2H3AQ71DI3 136 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 MDP1Q86V88 176 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 CPEB3Q8NE35 698 aaKnown RBP14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 OR5D18Q8NGL1 313 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 MARCH1Q8TCQ1 289 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 ARHGAP5-AS1Q96IT6 56 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 PDCD10Q9BUL8 212 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 OR2H1Q9GZK4 316 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 WNT5BQ9H1J7 359 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 JKAMPQ9P055 326 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 ANAPC10Q9UM13 185 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 TIMM10BQ9Y5J6 103 aa14.6□□□□□ -0.07
CDKN1A-201ENST00000244741 MFSD2BA6NFX1 497 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 SPDEFO95238 335 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 CELA3BP08861 270 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 HLA-GP17693 338 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 NAT1P18440 290 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 CCKARP32238 428 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 FGL1Q08830 312 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 ECH1Q13011 328 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 KISS1Q15726 138 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 LRRC37A5PQ49AS3 106 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 SLC51BQ86UW2 128 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 MYPOPQ86VE0 399 aaPredicted RBP14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 HOGA1Q86XE5 327 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 WDR31Q8NA23 367 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 CASTOR1Q8WTX7 329 aa14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 UTP20O75691 2785 aaKnown RBP14.59□□□□□ -0.07
CDKN1A-201ENST00000244741 PRF1P14222 555 aa14.58□□□□□ -0.07
CDKN1A-201ENST00000244741 CCNOP22674 350 aa14.58□□□□□ -0.07
CDKN1A-201ENST00000244741 VAMP1P23763 118 aa14.58□□□□□ -0.07
CDKN1A-201ENST00000244741 HOXC12P31275 282 aa14.58□□□□□ -0.07
CDKN1A-201ENST00000244741 UBE2V2Q15819 145 aa14.58□□□□□ -0.07
CDKN1A-201ENST00000244741 OR56B1Q8NGI3 324 aa14.58□□□□□ -0.07
CDKN1A-201ENST00000244741 FAM25EA8MYX2 175 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 MFNGO00587 321 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 RLN2P04090 185 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 FAHP16930 419 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 PTGFRP43088 359 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 HTR5AP47898 357 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 ATP1B3P54709 279 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 ARPC4P59998 168 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 NRN1LQ496H8 165 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 C11orf87Q6NUJ2 197 aa14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 FAHD2BQ6P2I3 314 aaPredicted RBP14.58□□□□□ -0.08
CDKN1A-201ENST00000244741 KCTD9Q7L273 389 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms