RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CXorf58Q96LI9 332 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF416Q9BWM5 594 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 SHARPINQ9H0F6 387 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 GAR1Q9NY12 217 aaKnown RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF319Q9P2F9 582 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 FBXO4Q9UKT5 387 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 GPR132Q9UNW8 380 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 SPTBN5Q9NRC6 3674 aaKnown RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 DNAH14Q0VDD8 3507 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 IGKV1-9A0A0C4DH69 117 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 RNF222A6NCQ9 220 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 NPIPA2E9PIF3 369 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 NPIPA3F8WFD2 350 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 RAMP1O60894 148 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 CBR3O75828 277 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 RLN2P04090 185 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 CSN2P05814 226 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 CRHP06850 196 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 UMODP07911 640 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 DLSTP36957 453 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 PTGFRP43088 359 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 OR3A4PP47883 348 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF84P51523 738 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM50BP56557 158 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 MRPS34P82930 218 aaKnown RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 NAAAQ02083 359 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 ZFP36L1Q07352 338 aaKnown RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 ENDOGQ14249 297 aaKnown RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 MICBQ29980 383 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF528Q3MIS6 628 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 PRAMEF20Q5VT98 475 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 SUMO4Q6EEV6 95 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 C17orf107Q6ZR85 190 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 LHFPL1Q86WI0 220 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 MAML2Q8IZL2 1156 aaPredicted RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 STPG2Q8N412 459 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 INO80EQ8NBZ0 244 aaPredicted RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM104Q8NE00 496 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 OR9K2Q8NGE7 335 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 OR52H1Q8NGJ2 320 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 OR5H2Q8NGV7 314 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 STOML3Q8TAV4 291 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 ST8SIA4Q92187 359 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 NABP1Q96AH0 204 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 CPNE2Q96FN4 548 aaPredicted RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 GPER1Q99527 375 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 PIGQQ9BRB3 760 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 NICN1Q9BSH3 213 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 CHST5Q9GZS9 411 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF160Q9HCG1 818 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 RAB18Q9NP72 206 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 PCDHGA1Q9Y5H4 931 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 HS3ST3B1Q9Y662 390 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 TNRC6BQ9UPQ9 1833 aaKnown RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 PHF3Q92576 2039 aaKnown RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 CCDC187A0A096LP49 1063 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 SOCS1O15524 211 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 ZIC3O60481 467 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 CRTAPO75718 401 aaPredicted RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 KLF7O75840 302 aaPredicted RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 SFT2D2O95562 160 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 MT-CO3P00414 261 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 PMP2P02689 132 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 HOXD4P09016 255 aaPredicted RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 SLC2A1P11166 492 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 LYL1P12980 280 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 TDGF1P13385 188 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 CPT2P23786 658 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 PSMB6P28072 239 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 MLF1P58340 268 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 KISS1Q15726 138 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 SGCAQ16586 387 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 FAM27BQ5VT28 67 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 DRAM2Q6UX65 266 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 Q7L0L9 218 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 CCDC36Q8IYA8 594 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 C20orf196Q8IYI0 205 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 KCNE4Q8WWG9 221 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 HAS2Q92819 552 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 MR1Q95460 341 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 SPTSSAQ969W0 71 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 SPSB1Q96BD6 273 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 LINC00052Q96N35 136 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 BBC3Q96PG8 261 aaPredicted RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 GAREM1Q9H706 876 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 FN3KRPQ9HA64 309 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 PROK2Q9HC23 129 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF230Q9UIE0 474 aaPredicted RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF391Q9UJN7 358 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 DKKL1Q9UK85 242 aa6.81□□□□□ -1.32
CXCR4-201ENST00000241393 PTRH2Q9Y3E5 179 aaKnown RBP6.81□□□□□ -1.32
CXCR4-201ENST00000241393 TEX13DA0A0J9YY54 714 aaPredicted RBP6.8□□□□□ -1.32
CXCR4-201ENST00000241393 LOC105371267A0A1B0GV96 52 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 B4E171 279 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 F8VVB4 439 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 F8VWA3 439 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 M0R135 149 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 RRP8O43159 456 aaKnown RBP6.8□□□□□ -1.32
CXCR4-201ENST00000241393 OPN1LWP04000 364 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 CCL3P10147 92 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms