RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PTGER4P35408 488 aa17.93■□□□□ 0.46
SNX3-201ENST00000230085 CCL11P51671 97 aa17.93■□□□□ 0.46
SNX3-201ENST00000230085 POU3F1Q03052 451 aaPredicted RBP17.93■□□□□ 0.46
SNX3-201ENST00000230085 EXT1Q16394 746 aa17.93■□□□□ 0.46
SNX3-201ENST00000230085 RTN4RL2Q86UN3 420 aa17.93■□□□□ 0.46
SNX3-201ENST00000230085 OR51E1Q8TCB6 317 aa17.93■□□□□ 0.46
SNX3-201ENST00000230085 GINS3Q9BRX5 216 aa17.93■□□□□ 0.46
SNX3-201ENST00000230085 STRAPQ9Y3F4 350 aaKnown RBP17.93■□□□□ 0.46
SNX3-201ENST00000230085 SGCEO43556 437 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 S100A6P06703 90 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 IL11P20809 199 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 CPT2P23786 658 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 RBMXP38159 391 aaKnown RBP17.92■□□□□ 0.46
SNX3-201ENST00000230085 OR3A4PP47883 348 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 SNU13P55769 128 aaKnown RBP17.92■□□□□ 0.46
SNX3-201ENST00000230085 GPR157Q5UAW9 335 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 ZFP82Q8N141 532 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 LRTM2Q8N967 370 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 M1APQ8TC57 530 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 EXTL1Q92935 676 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 THOC3Q96J01 351 aaKnown RBP17.92■□□□□ 0.46
SNX3-201ENST00000230085 SERINC1Q9NRX5 453 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 B3GAT1Q9P2W7 334 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 BOD1L1Q8NFC6 3051 aa17.92■□□□□ 0.46
SNX3-201ENST00000230085 CRYM-AS1A6NIL9 109 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 LINC00587B1AMM8 73 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 OR8U9P0C7N5 309 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 ITGA3P26006 1051 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 FCGR2CP31995 323 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 ARFRP1Q13795 201 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 TBR1Q16650 682 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 LFNGQ8NES3 379 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 OR8B12Q8NGG6 310 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 OR1J1Q8NGS3 322 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 OR8U1Q8NH10 309 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 FNDC9Q8TBE3 224 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 NANPQ8TBE9 248 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 C10orf35Q96D05 121 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 CPNE2Q96FN4 548 aaPredicted RBP17.91■□□□□ 0.46
SNX3-201ENST00000230085 PNRC2Q9NPJ4 139 aaKnown RBP17.91■□□□□ 0.46
SNX3-201ENST00000230085 CACNA1GO43497 2377 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 C7orf77A4D0Y5 90 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 E5RGE8 158 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 SERPINA7P05543 415 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 GLRA1P23415 457 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 TMEM33P57088 247 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 GRB2P62993 217 aaKnown RBP17.91■□□□□ 0.46
SNX3-201ENST00000230085 CSNK2A1P68400 391 aaPredicted RBP17.91■□□□□ 0.46
SNX3-201ENST00000230085 IAH1Q2TAA2 248 aaPredicted RBP17.91■□□□□ 0.46
SNX3-201ENST00000230085 SLC25A47Q6Q0C1 308 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 CRIP3Q6Q6R5 217 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 HIST2H3AQ71DI3 136 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 PNLDC1Q8NA58 520 aaKnown RBP17.91■□□□□ 0.46
SNX3-201ENST00000230085 CSNK2A3Q8NEV1 391 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 NOXO1Q8NFA2 376 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 OR8G5Q8NG78 346 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 OR14K1Q8NGZ2 314 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 GALNT14Q96FL9 552 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 AKR1E2Q96JD6 320 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 C5orf34Q96MH7 638 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 EHFQ9NZC4 300 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 NOSIPQ9Y314 301 aaKnown RBP17.91■□□□□ 0.46
SNX3-201ENST00000230085 NSG2Q9Y328 171 aa17.91■□□□□ 0.46
SNX3-201ENST00000230085 BSNQ9UPA5 3926 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 IGLV3-32A0A0A0MS00 114 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 IFNA21P01568 189 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 PGA4P0DJD7 388 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 PGA3P0DJD8 388 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 RAB5AP20339 215 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 HIST3H3Q16695 136 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 AWAT1Q58HT5 328 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 PSMF1Q92530 271 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 PECRQ9BY49 303 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 GPR84Q9NQS5 396 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 LUZP4Q9P127 313 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 LHX6Q9UPM6 363 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 NBEAQ8NFP9 2946 aa17.9■□□□□ 0.46
SNX3-201ENST00000230085 TRBV11-1A0A0K0K1C0 115 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 LOC102725191A0A1B0GVB3 256 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 GATCO43716 136 aaKnown RBP17.89■□□□□ 0.45
SNX3-201ENST00000230085 TSPAN15O95858 294 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 GLAP06280 429 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 ACKR3P25106 362 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 MSX1P28360 303 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 BIDP55957 195 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 S100A10P60903 97 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 OR2A2Q6IF42 318 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 SGPP2Q8IWX5 399 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 FDCSPQ8NFU4 85 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 OR2AJ1Q8NGZ0 328 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 THAP3Q8WTV1 239 aaPredicted RBP17.89■□□□□ 0.45
SNX3-201ENST00000230085 DNAJA3Q96EY1 480 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 MRGPRX4Q96LA9 322 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 NAA11Q9BSU3 229 aaPredicted RBP17.89■□□□□ 0.45
SNX3-201ENST00000230085 MED29Q9NX70 200 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 CACNA1BQ00975 2339 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 BORCS7-ASMTA0A0B4J1R7 106 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 IGKV1-9A0A0C4DH69 117 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 GMFGO60234 142 aa17.89■□□□□ 0.45
SNX3-201ENST00000230085 CRTAPO75718 401 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms