RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 IL36RNQ9UBH0 155 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 MYRFQ9Y2G1 1151 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 A0A1W2PPH5 198 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 NDUFA7O95182 113 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 OCM2P0CE71 109 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 OCMP0CE72 109 aaPredicted RBP11.61□□□□□ -0.55
GPN3-201ENST00000228827 ATF1P18846 271 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 COX7A1P24310 79 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 AZGP1P25311 298 aaKnown RBP11.61□□□□□ -0.55
GPN3-201ENST00000228827 PAX6P26367 422 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 SNU13P55769 128 aaKnown RBP11.61□□□□□ -0.55
GPN3-201ENST00000228827 MTCP1P56278 107 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 EDDM3BP56851 147 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 ACTA2P62736 377 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 ACTG2P63267 376 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 ALKBH1Q13686 389 aaKnown RBP11.61□□□□□ -0.55
GPN3-201ENST00000228827 GALEQ14376 348 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 OLFML2AQ68BL7 652 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 FDX2Q6P4F2 183 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 ZNF782Q6ZMW2 699 aaPredicted RBP11.61□□□□□ -0.55
GPN3-201ENST00000228827 C17orf107Q6ZR85 190 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 ZNF676Q8N7Q3 588 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 OR51A4Q8NGJ6 313 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 OR13C3Q8NGS6 347 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 RFT1Q96AA3 541 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 MRPL48Q96GC5 212 aaKnown RBP11.61□□□□□ -0.55
GPN3-201ENST00000228827 Q96MT0 163 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 ISG20L2Q9H9L3 353 aaKnown RBP11.61□□□□□ -0.55
GPN3-201ENST00000228827 FAM118AQ9NWS6 357 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 MMP24Q9Y5R2 645 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 NBEAL1Q6ZS30 2694 aa11.61□□□□□ -0.55
GPN3-201ENST00000228827 A0A1B0GUS0 222 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 CLPSL1A2RUU4 121 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 K7N7A8 449 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 MPZL2O60487 215 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 ISG15P05161 165 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 CHRM2P08172 466 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 BCL3P20749 454 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 DUSP1P28562 367 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 NPBWR2P48146 333 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 CCR9P51686 369 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 BMXP51813 675 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 ACSM1Q08AH1 577 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 GDPGP1Q6ZNW5 385 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 C11orf42Q8N5U0 333 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 OR13C9Q8NGT0 318 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 WFDC12Q8WWY7 111 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 SPACA5Q96QH8 159 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 FAM234AQ9H0X4 552 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 SLITRK2Q9H156 845 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 RBFOX1Q9NWB1 397 aaKnown RBP11.6□□□□□ -0.55
GPN3-201ENST00000228827 VPREB3Q9UKI3 123 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 HHLA2Q9UM44 414 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 DOCK11Q5JSL3 2073 aa11.6□□□□□ -0.55
GPN3-201ENST00000228827 TMEM82A0PJX8 343 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 OR4C45A6NMZ5 311 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 ZNF737O75373 536 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 FADS2O95864 444 aaKnown RBP11.59□□□□□ -0.55
GPN3-201ENST00000228827 HAND1O96004 215 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 CYB5AP00167 134 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 PRKACBP22694 351 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 RPL15P61313 204 aaKnown RBP11.59□□□□□ -0.55
GPN3-201ENST00000228827 EDDM3AQ14507 147 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 PRR31Q5SQ13 230 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 DHRS7BQ6IAN0 325 aaPredicted RBP11.59□□□□□ -0.55
GPN3-201ENST00000228827 LHFPL2Q6ZUX7 228 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 UTS2BQ765I0 119 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 GDPD3Q7L5L3 318 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 RNF144BQ7Z419 303 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 DNAAF1Q8NEP3 725 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 OR52I1Q8NGK6 324 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 LINC01006Q8NI28 216 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 APH1BQ8WW43 257 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 STMN2Q93045 179 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 OPALINQ96PE5 141 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 CHST6Q9GZX3 395 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 HEXA-AS1Q9H8Q6 139 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 ERVK13-1Q9NX77 482 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 RNF114Q9Y508 228 aa11.59□□□□□ -0.55
GPN3-201ENST00000228827 hCG_1809904A0A1W2PP81 198 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 A0A1W2PPE2 198 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 A0A1W2PR64 198 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 A0A1W2PRV1 198 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 E9PI62 339 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 IGHA1P01876 353 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 PRKACAP17612 351 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 GABRR1P24046 479 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 RAB40BQ12829 278 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 LY6EQ16553 131 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 SMN1Q16637 294 aaKnown RBP11.58□□□□□ -0.56
GPN3-201ENST00000228827 MIDNQ504T8 468 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 BRICD5Q6PL45 260 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 Q6ZSV7 163 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 Q8IYB0 196 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 FAM58AQ8N1B3 248 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 TPRX1Q8N7U7 411 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 BEND2Q8NDZ0 799 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 ZNF555Q8NEP9 628 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 OR5D18Q8NGL1 313 aa11.58□□□□□ -0.56
GPN3-201ENST00000228827 SPSB1Q96BD6 273 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms