RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 C14orf79Q96F83 325 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 GABARAPL3Q9BY60 117 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 PPIAL4AQ9Y536 164 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 SMAD7O15105 426 aaKnown RBP9.36□□□□□ -0.91
TRPS1-201ENST00000220888 SOX15O60248 233 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 CD37P11049 281 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 CDC34P49427 236 aaPredicted RBP9.36□□□□□ -0.91
TRPS1-201ENST00000220888 PJVKQ0ZLH3 352 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 FFAR4Q5NUL3 377 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 A0A1B0GUH1 482 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 DRD3P35462 400 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 ERVFRD-1P60508 538 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 DEGS2Q6QHC5 323 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 MAVSQ7Z434 540 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 ZNF683Q8IZ20 524 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 P2RX4Q99571 388 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 CABLES2Q9BTV7 478 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 SLC25A37Q9NYZ2 338 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 UBR2Q8IWV8 1755 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 GZMHP20718 246 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 CD80P33681 288 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 OR6X1Q8NH79 312 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 CXorf58Q96LI9 332 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 RNF2Q99496 336 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 SLC25A32Q9H2D1 315 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 SIGLEC1Q9BZZ2 1709 aa9.36□□□□□ -0.91
TRPS1-201ENST00000220888 OOEPA6NGQ2 149 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 GSTZ1O43708 216 aaPredicted RBP9.35□□□□□ -0.91
TRPS1-201ENST00000220888 LALBAP00709 142 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 PGA3P0DJD8 388 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 HOXC8P31273 242 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 GPNMBQ14956 572 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 SLC25A42Q86VD7 318 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 OR4C12Q96R67 309 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 UQCC2Q9BRT2 126 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 ABHD14AQ9BUJ0 271 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 ZNF552Q9H707 407 aaPredicted RBP9.35□□□□□ -0.91
TRPS1-201ENST00000220888 WDR54Q9H977 334 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 FBXO8Q9NRD0 319 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 A0A1W2PPC1 479 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 TMEM127O75204 238 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 HAND1O96004 215 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 C21orf58P58505 322 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 SHISA5Q8N114 240 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 GATA6Q92908 595 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 RAB40CQ96S21 281 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 CDCA4Q9BXL8 241 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 DNAJB12Q9NXW2 375 aaKnown RBP9.35□□□□□ -0.91
TRPS1-201ENST00000220888 PLEKHB1Q9UF11 243 aaPredicted RBP9.35□□□□□ -0.91
TRPS1-201ENST00000220888 TRAPPC4Q9Y296 219 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 MYH6P13533 1939 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 PAPPA2Q9BXP8 1791 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 C5orf67F2Z3F1 127 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 NEURL1O76050 574 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 PF4V1P10720 104 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 ZNF141Q15928 474 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 FAAP20Q6NZ36 180 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 EBLN2Q6P2I7 272 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 SH2D5Q6ZV89 423 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 FLYWCH2Q96CP2 140 aaKnown RBP9.35□□□□□ -0.91
TRPS1-201ENST00000220888 A0A1W2PPQ1 181 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 FAM181BA6NEQ2 426 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 TGOLN2O43493 480 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 GYPAP02724 150 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 ARG1P05089 322 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 HTR1DP28221 377 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 SPCS3P61009 180 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 TMEM128Q5BJH2 165 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 ZNF596Q8TC21 504 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 FAAP24Q9BTP7 215 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 SRRQ9GZT4 340 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 PLPP3O14495 311 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 HIST1H1EP10412 219 aaKnown RBP9.35□□□□□ -0.91
TRPS1-201ENST00000220888 FBXW9Q5XUX1 488 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 PDPNQ86YL7 162 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 PRSS3P2Q8NHM4 247 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 MAP6Q96JE9 813 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 C12orf10Q9HB07 376 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 FAM60AQ9NP50 221 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 TMED3Q9Y3Q3 217 aa9.35□□□□□ -0.91
TRPS1-201ENST00000220888 SMLR1H3BR10 107 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 CDIPTO14735 213 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 PRR35P0CG20 571 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 CLEC12BQ2HXU8 276 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 LYSMD2Q8IV50 215 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 TMEM229BQ8NBD8 167 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 ORAI1Q96D31 301 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 VSTM2LQ96N03 204 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 NPAS1Q99742 590 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 ZNF426Q9BUY5 554 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 PPP1CCP36873 323 aaKnown RBP9.34□□□□□ -0.91
TRPS1-201ENST00000220888 KIR3DL2P43630 455 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 KLRB1Q12918 225 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 SPINK9Q5DT21 86 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 MYPOPQ86VE0 399 aaPredicted RBP9.34□□□□□ -0.91
TRPS1-201ENST00000220888 C5orf17Q8NAS9 161 aa9.34□□□□□ -0.91
TRPS1-201ENST00000220888 ARHGAP5-AS1Q96IT6 56 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms