RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 C14orf79Q96F83 325 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 MARS2Q96GW9 593 aaKnown RBP15.02□□□□□ -0.01
USB1-201ENST00000219281 REEP6Q96HR9 211 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 WFDC1Q9HC57 220 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 FAM212BQ9NTI7 297 aaPredicted RBP15.02□□□□□ -0.01
USB1-201ENST00000219281 FOXD3Q9UJU5 478 aaPredicted RBP15.02□□□□□ -0.01
USB1-201ENST00000219281 E5RGE8 158 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 LAMTOR5O43504 91 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 XRCC2O43543 280 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 ZIC3O60481 467 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 VAMP5O95183 116 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 MIDNQ504T8 468 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 PHLDA2Q53GA4 152 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 PEAR1Q5VY43 1037 aaPredicted RBP15.01□□□□□ -0.01
USB1-201ENST00000219281 CCDC54Q8NEL0 328 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 SFT2D1Q8WV19 159 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 SPSB1Q96BD6 273 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 RPS10P5Q9NQ39 176 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 NSG2Q9Y328 171 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 TIMM10BQ9Y5J6 103 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 EML6Q6ZMW3 1958 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 TNFSF11O14788 317 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 HGFACQ04756 655 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 HABP2Q14520 560 aaPredicted RBP15.01□□□□□ -0.01
USB1-201ENST00000219281 DKKL1Q9UK85 242 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 HSF4Q9ULV5 492 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 KPTNQ9Y664 436 aa15.01□□□□□ -0.01
USB1-201ENST00000219281 SGCEO43556 437 aa15□□□□□ -0.01
USB1-201ENST00000219281 LIFP15018 202 aa15□□□□□ -0.01
USB1-201ENST00000219281 SNCAP37840 140 aa15□□□□□ -0.01
USB1-201ENST00000219281 ZNF616Q08AN1 781 aa15□□□□□ -0.01
USB1-201ENST00000219281 PIGYQ3MUY2 71 aa15□□□□□ -0.01
USB1-201ENST00000219281 FAM27BQ5VT28 67 aa15□□□□□ -0.01
USB1-201ENST00000219281 ZNF774Q6NX45 483 aa15□□□□□ -0.01
USB1-201ENST00000219281 PROK2Q9HC23 129 aa15□□□□□ -0.01
USB1-201ENST00000219281 STARD10Q9Y365 291 aa15□□□□□ -0.01
USB1-201ENST00000219281 A0A0J9YW62 118 aa15□□□□□ -0.01
USB1-201ENST00000219281 GEMIN2O14893 280 aaKnown RBP15□□□□□ -0.01
USB1-201ENST00000219281 CRYGSP22914 178 aa15□□□□□ -0.01
USB1-201ENST00000219281 DTYMKP23919 212 aa15□□□□□ -0.01
USB1-201ENST00000219281 CHATP28329 748 aa15□□□□□ -0.01
USB1-201ENST00000219281 FHITP49789 147 aa15□□□□□ -0.01
USB1-201ENST00000219281 MEOX2P50222 304 aa15□□□□□ -0.01
USB1-201ENST00000219281 DSCR4P56555 118 aaPredicted RBP15□□□□□ -0.01
USB1-201ENST00000219281 RAB5BP61020 215 aa15□□□□□ -0.01
USB1-201ENST00000219281 SLC22A25Q6T423 547 aa15□□□□□ -0.01
USB1-201ENST00000219281 C15orf54Q8N8G6 183 aa15□□□□□ -0.01
USB1-201ENST00000219281 OR5L1Q8NGL2 311 aa15□□□□□ -0.01
USB1-201ENST00000219281 ANGPTL4Q9BY76 406 aa15□□□□□ -0.01
USB1-201ENST00000219281 ARV1Q9H2C2 271 aa15□□□□□ -0.01
USB1-201ENST00000219281 RNF122Q9H9V4 155 aa15□□□□□ -0.01
USB1-201ENST00000219281 MASP2O00187 686 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 GPR137BO60478 399 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 LCATP04180 440 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 DANCRP0C864 163 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 FOLR2P14207 255 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 RGS19P49795 217 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 SUCLG1P53597 346 aaKnown RBP14.99□□□□□ -0.01
USB1-201ENST00000219281 SNRPEP62304 92 aaKnown RBP14.99□□□□□ -0.01
USB1-201ENST00000219281 MRPS34P82930 218 aaKnown RBP14.99□□□□□ -0.01
USB1-201ENST00000219281 CNN3Q15417 329 aaKnown RBP14.99□□□□□ -0.01
USB1-201ENST00000219281 C1orf210Q8IVY1 113 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 OR52M1Q8NGK5 317 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 BORCS8Q96FH0 119 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 GALNT14Q96FL9 552 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 USB1Q9BQ65 265 aaKnown RBP14.99□□□□□ -0.01
USB1-201ENST00000219281 SRXN1Q9BYN0 137 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 TECTAO75443 2155 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 BORCS7-ASMTA0A0B4J1R7 106 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 SYNGR3O43761 229 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 IFNA4P05014 189 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 SNRNP70P08621 437 aaKnown RBP14.99□□□□□ -0.01
USB1-201ENST00000219281 PATE4P0C8F1 98 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 FGF5P12034 268 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 CAMLGP49069 296 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 RBP2P50120 134 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 PDCD1Q15116 288 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 RAB35Q15286 201 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 GUK1Q16774 197 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 OR10AD1Q8NGE0 317 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 OR11L1Q8NGX0 322 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 HIST1H2BAQ96A08 127 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 INTS12Q96CB8 462 aaKnown RBP14.99□□□□□ -0.01
USB1-201ENST00000219281 C18orf12Q96KH6 178 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 SLC2A9Q9NRM0 540 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 ZDHHC8Q9ULC8 765 aa14.99□□□□□ -0.01
USB1-201ENST00000219281 IGKV1-12A0A0C4DH73 117 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 H7C1Q1 480 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 EIF3GO75821 320 aaKnown RBP eCLIP14.98□□□□□ -0.01
USB1-201ENST00000219281 IGKV1D-12P01611 117 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 SEC11BP0C7V7 166 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 HMGN3Q15651 99 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 LIAT1Q6ZQX7 453 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 TMEM156Q8N614 296 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 EIF5A2Q9GZV4 153 aaKnown RBP14.98□□□□□ -0.01
USB1-201ENST00000219281 SH3BGRL3Q9H299 93 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 RGCCQ9H4X1 137 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 IFT22Q9H7X7 185 aa14.98□□□□□ -0.01
USB1-201ENST00000219281 IGHV1-45A0A0A0MS14 117 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 NTN3O00634 580 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms