RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 MRPS24Q96EL2 167 aaKnown RBP11.05□□□□□ -0.64
TIMP1-201ENST00000218388 GAL3ST1Q99999 423 aa11.05□□□□□ -0.64
TIMP1-201ENST00000218388 MRI1Q9BV20 369 aa11.05□□□□□ -0.64
TIMP1-201ENST00000218388 WDR13Q9H1Z4 485 aa11.05□□□□□ -0.64
TIMP1-201ENST00000218388 DCSTAMPQ9H295 470 aa11.05□□□□□ -0.64
TIMP1-201ENST00000218388 RBFOX1Q9NWB1 397 aaKnown RBP11.05□□□□□ -0.64
TIMP1-201ENST00000218388 RSL24D1Q9UHA3 163 aaKnown RBP11.05□□□□□ -0.64
TIMP1-201ENST00000218388 ITGB1BP2Q9UKP3 347 aa11.05□□□□□ -0.64
TIMP1-201ENST00000218388 PCDHB10Q9UN67 800 aa11.05□□□□□ -0.64
TIMP1-201ENST00000218388 IGHV4-30-2A0A087WSY4 118 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 SMIM30A4D0T7 59 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 VWC2LB2RUY7 222 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.04□□□□□ -0.64
TIMP1-201ENST00000218388 ZNF205O95201 554 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 HEXAP06865 529 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 SFTPBP07988 381 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 CLEC2LP0C7M8 214 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 CPT2P23786 658 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 TGFBR1P36897 503 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 RPS19P39019 145 aaKnown RBP11.04□□□□□ -0.64
TIMP1-201ENST00000218388 NPBWR2P48146 333 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 FGF12P61328 243 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 HNRNPA0Q13151 305 aaKnown RBP11.04□□□□□ -0.64
TIMP1-201ENST00000218388 ZMYND11Q15326 602 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 P2RY14Q15391 338 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 ZNF404Q494X3 552 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 SPIN3Q5JUX0 258 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 FAM166AQ6J272 317 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 DCDC5Q6ZRR9 648 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 BATF2Q8N1L9 274 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 OSR2Q8N2R0 312 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 DEFB108BQ8NET1 73 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 OR10K1Q8NGX5 313 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 KCNG3Q8TAE7 436 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 SLC25A46Q96AG3 418 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 FAM3DQ96BQ1 224 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 Q96MF0 132 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 DNTTIP1Q9H147 329 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 TMEM165Q9HC07 324 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 HMG20AQ9NP66 347 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 MIOXQ9UGB7 285 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 DAPK2Q9UIK4 370 aa11.04□□□□□ -0.64
TIMP1-201ENST00000218388 IGHV3OR15-7A0A075B7D8 119 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 A0A0G2JK05 382 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 OR2AT4A6NND4 320 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 H3BMQ9 156 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 CRTAPO75718 401 aaPredicted RBP11.03□□□□□ -0.64
TIMP1-201ENST00000218388 SOX6P35712 828 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 RORCP51449 518 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 CAV3P56539 151 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 SCAND1P57086 179 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 IL13RA2Q14627 380 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 FAM189A2Q15884 450 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 IDNKQ5T6J7 187 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 NLRC3Q7RTR2 1065 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 SLC36A1Q7Z2H8 476 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 OR2W3Q7Z3T1 314 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 LINC00596Q86U02 117 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 NR2C2APQ86WQ0 139 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 C19orf18Q8NEA5 215 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 Q8NFD4 153 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 NDNFQ8TB73 568 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 AP3S1Q92572 193 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 RAB39BQ96DA2 213 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 RBM38Q9H0Z9 239 aaKnown RBP11.03□□□□□ -0.64
TIMP1-201ENST00000218388 LIN7BQ9HAP6 207 aa11.03□□□□□ -0.64
TIMP1-201ENST00000218388 PRRC2AP48634 2157 aaKnown RBP11.02□□□□□ -0.65
TIMP1-201ENST00000218388 DPPA5A6NC42 116 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 RFPL4AA6NLU0 287 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 CEACAM18A8MTB9 384 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 RFPL4AL1F8VTS6 287 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 F8VVB4 439 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 F8VWA3 439 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 H3BUI4 141 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 SH2D1BO14796 132 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 GYPAP02724 150 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 VSIG8P0DPA2 414 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 CALCBP10092 127 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 PSG2P11465 335 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 MGMTP16455 207 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 USF1P22415 310 aaPredicted RBP11.02□□□□□ -0.65
TIMP1-201ENST00000218388 RBMXP38159 391 aaKnown RBP11.02□□□□□ -0.65
TIMP1-201ENST00000218388 GABRA2P47869 451 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 SNU13P55769 128 aaKnown RBP11.02□□□□□ -0.65
TIMP1-201ENST00000218388 CLDN12P56749 244 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 ZNF146Q15072 292 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 NHLRC3Q5JS37 347 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 ATPAF1Q5TC12 328 aaPredicted RBP11.02□□□□□ -0.65
TIMP1-201ENST00000218388 STUMQ69YW2 141 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 KRTAP1-3Q8IUG1 177 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 OR51D1Q8NGF3 324 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 OR8B3Q8NGG8 313 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 OR51T1Q8NGJ9 327 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 SLC25A28Q96A46 364 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 KCTD12Q96CX2 325 aaKnown RBP11.02□□□□□ -0.65
TIMP1-201ENST00000218388 SEH1LQ96EE3 360 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 POM121Q96HA1 1249 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 MED30Q96HR3 178 aa11.02□□□□□ -0.65
TIMP1-201ENST00000218388 C1orf147Q96MC9 270 aaPredicted RBP11.02□□□□□ -0.65
TIMP1-201ENST00000218388 OR8B2Q96RD0 313 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms