RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Zfp456B2RUK9 458 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Vmn2r30K7N5W1 852 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Spata22Q5SV06 358 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Ltc4sQ60860 150 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Foxj3Q8BUR3 623 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Acer1Q8R4X1 273 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Ubl7Q91W67 380 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Hcfc1r1Q9CYQ5 120 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Trp53tg5Q9D976 238 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Asah1Q9WV54 394 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 MokQ9WVS4 420 aa20.04■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Igkv13-85A0A075B666 115 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Ndufaf6A2AIL4 333 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Tomm5B1AXP6 51 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Gm21981D3Z6Q6 369 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Slco5a1E9PVD9 850 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Ceacam16E9QA28 426 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Oosp3G5E8D7 195 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 OpcmlG5E8G3 345 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 PhyhO35386 338 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Bmi1P25916 324 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Tspan5P62080 268 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Rgs16P97428 201 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Vezf1Q5SXC4 518 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Foxg1Q60987 481 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 N6amt1Q6SKR2 214 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Adam20Q7M763 760 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Lrrc75aQ7TSF4 339 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Fbxo4Q8CHQ0 385 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Sla2Q8R4L0 259 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 NmuQ9QXK8 174 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 PlpbpQ9Z2Y8 274 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 AtrxQ61687 2476 aaKnown RBP20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Lce6aD3YV94 81 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Zfp616J3QN14 987 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Gm21812J3QN84 227 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Capza1P47753 286 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Tmprss11bQ14C59 416 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Fbxw16Q497Z0 464 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Fam98bQ80VD1 429 aaKnown RBP20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Dnajc22Q8CHS2 339 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Abhd6Q8R2Y0 336 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Naa40Q8VE10 237 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Olfr518Q8VEW1 333 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Olfr131Q8VGC8 314 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 D10Wsu102eQ9CX66 185 aa20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Uqcrc1Q9CZ13 480 aaKnown RBP20.03■□□□□ 0.8
Upf3a-201ENSMUST00000043767 4930402F06RikA2AUQ8 332 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Vmn2r41E9Q5C7 852 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Vmn2r40F6W043 852 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 H2-M1F7CXU4 344 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Gm10428J3QNV7 132 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Vmn2r47K7N709 852 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 SparcP07214 302 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Rap2bP61226 183 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Hes5P70120 167 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Thbs3Q05895 956 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Ndufb6Q3UIU2 128 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Bbs12Q5SUD9 708 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Inca1Q6PKN7 231 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Olfr304Q7TS03 333 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Q8BTG6 205 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Pear1Q8VIK5 1034 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Scgb3a1Q920D7 104 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Rnps1Q99M28 305 aaKnown RBP20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 TpbpbQ9CQC0 121 aa20.02■□□□□ 0.8
Upf3a-201ENSMUST00000043767 Jmjd1cQ69ZK6 2350 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Olfr1179A2AUS6 307 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Tarm1B6A8R8 288 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 D430019H16RikJ3QPM6 83 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Klf9O35739 244 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Igh-VJ558P01758 117 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Dpagt1P42867 410 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Map2k6P70236 334 aaKnown RBP20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Pptc7Q6NVE9 310 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Scgb1c1Q7M742 95 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Olfr1500Q7TQQ3 311 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Sh2d7Q8BI17 458 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Olfr1487Q8VFQ6 315 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Cavin3Q91VJ2 260 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Lmntd1Q9D4C1 413 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Igkv19-93A0A0G2JFZ3 115 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Slc25a53A2AF28 346 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Gm15737D3YZR0 106 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 C2cd6E9Q152 557 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Olfr1221L7MU53 311 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Lin7bO88951 207 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Dio1Q61153 257 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Plppr1Q8BFZ2 325 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Fndc9Q8BJN4 226 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Cml2Q8CHQ9 238 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Defb6Q91VD6 63 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Ca15Q99N23 324 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Ccdc167Q9D162 97 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 GrinaQ9ESF4 345 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Tas2r4Q9JKT3 297 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Clcf1Q9QZM3 225 aa20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Srsf10Q9R0U0 262 aaKnown RBP20.01■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Olfr550E9Q544 316 aa20■□□□□ 0.79
Upf3a-201ENSMUST00000043767 Pcdh12O55134 1180 aa20■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms