RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Cldn15Q9Z0S5 227 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Prr23a1G3UW32 258 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Arg2O08691 354 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Il4P07750 140 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 PlatP11214 559 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Lbx1P52955 282 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Gm2016Q3TQZ4 144 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Zfp772Q3UQL6 416 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Nkain2Q4PNJ2 208 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Olfr3Q60879 313 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Pafah1b3Q61205 232 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Kctd9Q80UN1 339 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Elovl1Q9JLJ5 279 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Zfp599E9PWP1 548 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 MstnO08689 376 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 SlbpP97440 275 aaKnown RBP14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Tex30Q3TUU5 225 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Olfr323Q5NCD0 323 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Prss27Q8BJR6 328 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Magt1Q9CQY5 335 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Tmem50aQ9CXL1 157 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Clcf1Q9QZM3 225 aa14.97□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Saxo1B1AXP3 476 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Znf551B2RUI1 696 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 SparcP07214 302 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 FauP35545 74 aaKnown RBP14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Cpt2P52825 658 aaKnown RBP14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Nme2Q01768 152 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Tmprss12Q3V0Q7 336 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 6430531B16RikQ3V2J1 307 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Cxcl17Q5UW37 119 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Zfp663Q6NXM6 656 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Kazald1Q8BJ66 313 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Arl6ip5Q8R5J9 188 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Olfr539Q8VGL9 319 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 SelenosQ9BCZ4 190 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Nmrk2Q9D7C9 195 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Lysmd2Q9D7V2 215 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Gm12666A2AMD0 254 aaKnown RBP14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Tpi1P17751 299 aaKnown RBP14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Ear2P97425 156 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Tmem18Q3TUD9 140 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Znf219Q6IQX8 726 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Taf9bQ6NZA9 249 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Cggbp1Q8BHG9 167 aaKnown RBP14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Vmn1r235Q8R297 328 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Fam219aQ9D772 157 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Cmtm2aQ9DAR1 169 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Skp1Q9WTX5 163 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 CorinQ9Z319 1113 aa14.96□□□□□ -0.01
Ctcf-201ENSMUST00000005841 Gm21488A0A087WR99 222 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Gm3952A0A0A6YXJ1 191 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Olfr239A0PK55 315 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 SiglechB7ZMQ6 332 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Gm4177D3YTX5 305 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Vmn1r127K7N6J5 305 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Olfr55K7N6Q1 315 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Vmn1r142K7N6U0 305 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Olfr1564K7N6V7 318 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Rsu1Q01730 277 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Vdac2Q60930 295 aaKnown RBP14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Ptpmt1Q66GT5 193 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Tmem158Q6F5E0 286 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Sirt7Q8BKJ9 402 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Tusc5Q8C838 173 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Olfr1277Q8VF41 303 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Olfr378Q8VGT2 314 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Cacng5Q8VHW4 275 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Mrpl24Q9CQ06 216 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Serpinb7Q9D695 380 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Ceacam13Q9DAT7 263 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Lancl2Q9JJK2 450 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Rab25Q9WTL2 213 aa14.96□□□□□ -0.02
Ctcf-201ENSMUST00000005841 A0A286YDG0 184 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 R3hdmlA2A5I3 253 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Dmrta2A2A9A2 531 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Gm10376D3YXI8 184 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Gm8126E9Q1N7 198 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Gm10375L7N286 184 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Amy2P00688 508 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 P01658 132 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Rps23P62267 143 aaKnown RBP14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Tmbim1Q8BJZ3 309 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Vmn1r178Q8R2B6 304 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Pla2g16Q8R3U1 162 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Olfr135Q8VEY4 312 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Q9DAE7 121 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 1700001F09RikQ9DAR5 184 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Sh3bgrlQ9JJU8 114 aaKnown RBP14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Suclg1Q9WUM5 346 aaKnown RBP14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Olfr248E9Q1L6 309 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Tspan6O70401 245 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Gm9125P0DMR6 365 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 CfpP11680 464 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Mex3dQ3UE17 643 aaKnown RBP14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Cd55Q61475 390 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Spon2Q8BMS2 330 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Sdhaf3Q8BQU3 125 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Olfr1451Q8VFX5 310 aa14.95□□□□□ -0.02
Ctcf-201ENSMUST00000005841 Rtn4rQ99PI8 473 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms