RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CHRDQ9H2X0 955 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF728P0DKX0 622 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 CCL4P13236 92 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 THBS4P35443 961 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 CLINT1Q14677 625 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 MIDNQ504T8 468 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF468Q5VIY5 522 aaPredicted RBP12.73□□□□□ -0.37
SCARB2-221ENST00000640341 CRIP3Q6Q6R5 217 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 CARFQ8N187 725 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 MARS2Q96GW9 593 aaKnown RBP12.73□□□□□ -0.37
SCARB2-221ENST00000640341 ESRP2Q9H6T0 727 aaKnown RBP12.73□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF442Q9H7R0 627 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 FBXO7Q9Y3I1 522 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 RFNGQ9Y644 331 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF407Q9C0G0 2248 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 A0A0J9YW62 118 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 FIGNL2A6NMB9 653 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 PHF1O43189 567 aaPredicted RBP12.73□□□□□ -0.37
SCARB2-221ENST00000640341 PRF1P14222 555 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 AVPI1Q5T686 147 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 MAML2Q8IZL2 1156 aaPredicted RBP12.73□□□□□ -0.37
SCARB2-221ENST00000640341 FAM89BQ8N5H3 189 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 KIRREL1Q96J84 757 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 CLCC1Q96S66 551 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 PLA2G2EQ9NZK7 142 aa12.73□□□□□ -0.37
SCARB2-221ENST00000640341 RCL1Q9Y2P8 373 aaKnown RBP12.73□□□□□ -0.37
SCARB2-221ENST00000640341 CAMLGP49069 296 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 EIF5AP63241 154 aaKnown RBP12.72□□□□□ -0.37
SCARB2-221ENST00000640341 IL34Q6ZMJ4 242 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 OR14L1PQ8NHC6 308 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 PP6455Q8WZ26 134 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 SH3BGRL3Q9H299 93 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 CXCL12P48061 93 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 SNRPEP62304 92 aaKnown RBP12.72□□□□□ -0.37
SCARB2-221ENST00000640341 NHLH2Q02577 135 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 HGFACQ04756 655 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 SRXN1Q9BYN0 137 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 P4HTMQ9NXG6 502 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 CST4P01036 141 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 KLK3P07288 261 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-221ENST00000640341 NAT2P11245 290 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 CCL1P22362 96 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 RFC3P40938 356 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 RPS18P62269 152 aaKnown RBP12.72□□□□□ -0.37
SCARB2-221ENST00000640341 FBXW12Q6X9E4 464 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 OR52M1Q8NGK5 317 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 NUDT16L1Q9BRJ7 211 aaKnown RBP12.72□□□□□ -0.37
SCARB2-221ENST00000640341 ST3GAL6Q9Y274 331 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 ADAMTS9Q9P2N4 1935 aa12.72□□□□□ -0.37
SCARB2-221ENST00000640341 IGKV1-27A0A075B6S5 117 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 CCDC187A0A096LP49 1063 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 MBPP02686 304 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-221ENST00000640341 S100A6P06703 90 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 SLAMF9Q96A28 289 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 GPR179Q6PRD1 2367 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 MEX3AA1L020 520 aaKnown RBP12.71□□□□□ -0.37
SCARB2-221ENST00000640341 OR13C7P0DN81 318 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 CCL2P13500 99 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF32P17041 273 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 LSM6P62312 80 aaKnown RBP12.71□□□□□ -0.37
SCARB2-221ENST00000640341 HIST3H3Q16695 136 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 NEK7Q8TDX7 302 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 NABP1Q96AH0 204 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 MAGT1Q9H0U3 335 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 UBE2ZQ9H832 354 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-221ENST00000640341 BIN3Q9NQY0 253 aa12.71□□□□□ -0.37
SCARB2-221ENST00000640341 CARHSP1Q9Y2V2 147 aaKnown RBP12.71□□□□□ -0.37
SCARB2-221ENST00000640341 NDUFA2O43678 99 aa12.71□□□□□ -0.38
SCARB2-221ENST00000640341 DEDDO75618 318 aa12.71□□□□□ -0.38
SCARB2-221ENST00000640341 GLAP06280 429 aa12.71□□□□□ -0.38
SCARB2-221ENST00000640341 RBP2P50120 134 aa12.71□□□□□ -0.38
SCARB2-221ENST00000640341 DHRS7BQ6IAN0 325 aaPredicted RBP12.71□□□□□ -0.38
SCARB2-221ENST00000640341 IP6K3Q96PC2 410 aa12.71□□□□□ -0.38
SCARB2-221ENST00000640341 RGCCQ9H4X1 137 aa12.71□□□□□ -0.38
SCARB2-221ENST00000640341 SPACA1Q9HBV2 294 aa12.71□□□□□ -0.38
SCARB2-221ENST00000640341 FANCFQ9NPI8 374 aa12.71□□□□□ -0.38
SCARB2-221ENST00000640341 PISDQ9UG56 409 aa12.71□□□□□ -0.38
SCARB2-221ENST00000640341 A0A0G2JMM0 328 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 A0A1W2PPB8 328 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 A0A1W2PRS3 328 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 KIR3DP1A8MWS1 328 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 MSTNO14793 375 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 CXCL13O43927 109 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 JTBO76095 146 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 SRYQ05066 204 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 PLCXD3Q63HM9 321 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 SMIM8Q96KF7 97 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 Q96M66 194 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 NECAP2Q9NVZ3 263 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 SEMA5BQ9P283 1151 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 DNAJB11Q9UBS4 358 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 C3orf80F5H4A9 247 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 TNFSF12O43508 249 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 ARG1P05089 322 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 CD63P08962 238 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF806P0C7X5 589 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 NR2C1P13056 603 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 DUSP1P28562 367 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms