RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 FAM192AQ9GZU8 254 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 OR51B5Q9H339 312 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 TXNIPQ9H3M7 391 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 TAC3Q9UHF0 121 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 KLF13Q9Y2Y9 288 aaPredicted RBP0.77□□□□□ -2.29
CCDC7-211ENST00000638889 STRCP1A6NGW2 1772 aa0.77□□□□□ -2.29
CCDC7-211ENST00000638889 MYO9BQ13459 2157 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 SETD1AO15047 1707 aaKnown RBP0.76□□□□□ -2.29
CCDC7-211ENST00000638889 IGHV3-43A0A0B4J1X8 118 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 A0A1W2PRD5 423 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 H3BMM0 161 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 J3QT63 122 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 K7EPK0 472 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 RGS5O15539 181 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 NDUFS5O43920 106 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 PSIP1O75475 530 aaKnown RBP0.76□□□□□ -2.29
CCDC7-211ENST00000638889 UBCP0CG48 685 aaKnown RBP0.76□□□□□ -2.29
CCDC7-211ENST00000638889 ZNF22P17026 224 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-211ENST00000638889 TMEM53Q6P2H8 277 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 EIF3MQ7L2H7 374 aaKnown RBP0.76□□□□□ -2.29
CCDC7-211ENST00000638889 LINC00337Q8N6G1 96 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 OR4K13Q8NH42 304 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 UBE2WQ96B02 151 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 OPALINQ96PE5 141 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 SPACA5Q96QH8 159 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 OR8B2Q96RD0 313 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 MTG1Q9BT17 334 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-211ENST00000638889 TTTY12Q9BZ98 90 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 GABARAPL1Q9H0R8 117 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 ELOVL6Q9H5J4 265 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 RHOFQ9HBH0 211 aa0.76□□□□□ -2.29
CCDC7-211ENST00000638889 PLXNA3P51805 1871 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 ADAMTS7Q9UKP4 1686 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 SYNJ2BP-COX16A0A087WUM0 186 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 TRAV8-4A0A0B4J246 113 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 UPK1AO00322 258 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 MPHOSPH10O00566 681 aaKnown RBP0.75□□□□□ -2.29
CCDC7-211ENST00000638889 PTTG1O95997 202 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 P01737 135 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 OPN1SWP03999 348 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 CGB3P0DN86 165 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 CGB7P0DN87 165 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 PAX6P26367 422 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 CRABP2P29373 138 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 COILP38432 576 aaPredicted RBP0.75□□□□□ -2.29
CCDC7-211ENST00000638889 GPR1P46091 355 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 PSMB2P49721 201 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 RAD51Q06609 339 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 CST6Q15828 149 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 BEX5Q5H9J7 111 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 BZW1Q7L1Q6 419 aaKnown RBP0.75□□□□□ -2.29
CCDC7-211ENST00000638889 LYZL2Q7Z4W2 148 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 HS3ST5Q8IZT8 346 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 OR2K2Q8NGT1 345 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 LMX1AQ8TE12 382 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 TSEN15Q8WW01 171 aaKnown RBP0.75□□□□□ -2.29
CCDC7-211ENST00000638889 GABRG3Q99928 467 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 DEFB129Q9H1M3 183 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 RBM22Q9NW64 420 aaKnown RBP eCLIP0.75□□□□□ -2.29
CCDC7-211ENST00000638889 NAGKQ9UJ70 344 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 FADS3Q9Y5Q0 445 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 ZNF780BQ9Y6R6 833 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 C2orf16Q68DN1 1984 aa0.75□□□□□ -2.29
CCDC7-211ENST00000638889 F5H5P2 479 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 LY6LH3BQJ8 138 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 OR2A4O95047 310 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 CTLA4P16410 223 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 ARL2P36404 184 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 ZNF140P52738 457 aaPredicted RBP0.74□□□□□ -2.29
CCDC7-211ENST00000638889 RPL10AP62906 217 aaKnown RBP0.74□□□□□ -2.29
CCDC7-211ENST00000638889 PSG4Q00888 419 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 PRDX4Q13162 271 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 IDI1Q13907 227 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 TTC19Q6DKK2 380 aaPredicted RBP0.74□□□□□ -2.29
CCDC7-211ENST00000638889 TCF23Q7RTU1 214 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 FAM122BQ7Z309 247 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 CYP4Z2PQ8N1L4 340 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 ZNF738Q8NE65 137 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 OR4K2Q8NGD2 314 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 OR2V1Q8NHB1 315 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 OR2A7Q96R45 310 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 SRRQ9GZT4 340 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 NAA50Q9GZZ1 169 aaKnown RBP0.74□□□□□ -2.29
CCDC7-211ENST00000638889 LRRC19Q9H756 370 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 KIR3DX1Q9H7L2 352 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 PXMP2Q9NR77 195 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 PRO0628Q9UI54 55 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 U3KQK5 164 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 LAMB2P55268 1798 aa0.74□□□□□ -2.29
CCDC7-211ENST00000638889 COL4A1P02462 1669 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 IGHV2OR16-5A0A0B4J2B6 119 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 C19orf71A6NCJ1 209 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 HACD1B0YJ81 288 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 ERLIN1O75477 346 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 RHOCP08134 193 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 MLNP12872 115 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 IMPA1P29218 277 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 HMGN5P82970 282 aaKnown RBP0.73□□□□□ -2.29
CCDC7-211ENST00000638889 LAMTOR4Q0VGL1 99 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 PMVKQ15126 192 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms