RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 UCP2P55851 309 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 ARL6IP1Q15041 203 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 TAF9Q16594 264 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 PHYHD1Q5SRE7 291 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 PLXDC2Q6UX71 529 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 COMMD1Q8N668 190 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 OR2M3Q8NG83 312 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 CD300LFQ8TDQ1 290 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 DYRK2Q92630 601 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 GNRHR2Q96P88 292 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 TUBA4BQ9H853 241 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 NXT1Q9UKK6 140 aaKnown RBP9.53□□□□□ -0.88
SNIP1-204ENST00000638725 BRWD1Q9NSI6 2320 aa9.53□□□□□ -0.88
SNIP1-204ENST00000638725 C2CD4DB7Z1M9 353 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 SPRY1O43609 319 aaPredicted RBP9.52□□□□□ -0.88
SNIP1-204ENST00000638725 OR2J2O76002 312 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 OR13C7P0DN81 318 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 MSR1P21757 451 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 CTSSP25774 331 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 PPP1CCP36873 323 aaKnown RBP9.52□□□□□ -0.88
SNIP1-204ENST00000638725 PRSS12P56730 875 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 SLC35A1P78382 337 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 NHLH2Q02577 135 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 ENDOGQ14249 297 aaKnown RBP9.52□□□□□ -0.88
SNIP1-204ENST00000638725 RSPO1Q2MKA7 263 aaPredicted RBP9.52□□□□□ -0.88
SNIP1-204ENST00000638725 PHLDA2Q53GA4 152 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 RTL6Q6ICC9 239 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 C20orf196Q8IYI0 205 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 OR52M1Q8NGK5 317 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 HPSE2Q8WWQ2 592 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 RTN4IP1Q8WWV3 396 aaPredicted RBP9.52□□□□□ -0.88
SNIP1-204ENST00000638725 PP6455Q8WZ26 134 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 MARS2Q96GW9 593 aaKnown RBP9.52□□□□□ -0.88
SNIP1-204ENST00000638725 WDR77Q9BQA1 342 aaPredicted RBP9.52□□□□□ -0.88
SNIP1-204ENST00000638725 GINS3Q9BRX5 216 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 NAA60Q9H7X0 242 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 AK3Q9UIJ7 227 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 KCNIP3Q9Y2W7 256 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 SPAG17Q6Q759 2223 aa9.52□□□□□ -0.88
SNIP1-204ENST00000638725 A0A0U1RQV5 110 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 AQP7P3A6NL99 342 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 GPR137BO60478 399 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 EIF1BO60739 113 aaKnown RBP9.52□□□□□ -0.89
SNIP1-204ENST00000638725 CLN5O75503 358 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 ZNF728P0DKX0 622 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 EIF1P41567 113 aaKnown RBP9.52□□□□□ -0.89
SNIP1-204ENST00000638725 ASCL1P50553 236 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 POLR2GP62487 172 aaKnown RBP eCLIP9.52□□□□□ -0.89
SNIP1-204ENST00000638725 EIF3IQ13347 325 aaKnown RBP9.52□□□□□ -0.89
SNIP1-204ENST00000638725 PPA1Q15181 289 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 ABCA11PQ4W5N1 156 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 BRICD5Q6PL45 260 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 KDF1Q8NAX2 398 aaPredicted RBP9.52□□□□□ -0.89
SNIP1-204ENST00000638725 OR5L1Q8NGL2 311 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 TGIF2Q9GZN2 237 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 MIOXQ9UGB7 285 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 FAM221AA4D161 298 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 PIAS2O75928 621 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 TIAF1O95411 115 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 LTBRP36941 435 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 PMELP40967 661 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 ZNF133P52736 654 aaPredicted RBP9.52□□□□□ -0.89
SNIP1-204ENST00000638725 TSC22D1Q15714 1073 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 ZNF239Q16600 458 aaKnown RBP9.52□□□□□ -0.89
SNIP1-204ENST00000638725 IGSF11Q5DX21 431 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 RHBDD2Q6NTF9 364 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 TMEM182Q6ZP80 229 aaPredicted RBP9.52□□□□□ -0.89
SNIP1-204ENST00000638725 NAXEQ8NCW5 288 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 GJC3Q8NFK1 279 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 SLC39A7Q92504 469 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 KCNJ16Q9NPI9 418 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 RFNGQ9Y644 331 aa9.52□□□□□ -0.89
SNIP1-204ENST00000638725 SDK1Q7Z5N4 2213 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 IGLV3-32A0A0A0MS00 114 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 M0R135 149 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 TLX3O43711 291 aaPredicted RBP9.51□□□□□ -0.89
SNIP1-204ENST00000638725 GUCA1AP43080 201 aaPredicted RBP9.51□□□□□ -0.89
SNIP1-204ENST00000638725 CSNK1A1P48729 337 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 MTCP1P56278 107 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 LSM6P62312 80 aaKnown RBP9.51□□□□□ -0.89
SNIP1-204ENST00000638725 SNAI3Q3KNW1 292 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 PRAMEF20Q5VT98 475 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 FBXW12Q6X9E4 464 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 SYT13Q7L8C5 426 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 LURAP1LQ8IV03 231 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 CARFQ8N187 725 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 FAM213BQ8TBF2 198 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 SLC22A8Q8TCC7 542 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 ZNF799Q96GE5 643 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 NELFAQ9H3P2 528 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 NECAP2Q9NVZ3 263 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 MYOTQ9UBF9 498 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 CCDC187A0A096LP49 1063 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 IGHV3-15A0A0B4J1V0 119 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 FAM230AA0A1W2PPH8 454 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 NOVA1P51513 510 aaKnown RBP9.51□□□□□ -0.89
SNIP1-204ENST00000638725 SUCLG1P53597 346 aaKnown RBP9.51□□□□□ -0.89
SNIP1-204ENST00000638725 NXPH1P58417 271 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 NCMAPQ5T1S8 102 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 ZNF565Q8N9K5 539 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms