RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 RNF166Q96A37 237 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-259ENST00000638114 C10orf35Q96D05 121 aa13.75□□□□□ -0.21
CACNA1A-259ENST00000638114 SLC29A1Q99808 456 aa13.75□□□□□ -0.21
CACNA1A-259ENST00000638114 ZNF747Q9BV97 191 aa13.75□□□□□ -0.21
CACNA1A-259ENST00000638114 PKIBQ9C010 78 aa13.75□□□□□ -0.21
CACNA1A-259ENST00000638114 UNKLQ9H9P5 680 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-259ENST00000638114 CAB39Q9Y376 341 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-259ENST00000638114 POMT1Q9Y6A1 747 aa13.75□□□□□ -0.21
CACNA1A-259ENST00000638114 H0YAE9 185 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 J3QLW9 94 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 NPFFO15130 113 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 HTR1AP08908 422 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 ZNF19P17023 458 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 ZNF91Q05481 1191 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 CNN3Q15417 329 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 TMEM244Q5VVB8 128 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 NCR3LG1Q68D85 454 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 C1orf122Q6ZSJ8 110 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 LDLRAD3Q86YD5 345 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 ENTHD1Q8IYW4 607 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 PP6455Q8WZ26 134 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 LGALS12Q96DT0 336 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 BORCS8Q96FH0 119 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 METTL8Q9H825 291 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 HES4Q9HCC6 221 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 C19orf12Q9NSK7 152 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 FRRS1LQ9P0K9 344 aa13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 EXOGQ9Y2C4 368 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-259ENST00000638114 IGKV1-27A0A075B6S5 117 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 MPZL2O60487 215 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 INMTO95050 263 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 BAG2O95816 211 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 KNG1P01042 644 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 IGHV4-59P01825 116 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 FBP1P09467 338 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 DBTP11182 482 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 ZNF20P17024 532 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 GABRB1P18505 474 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 MDKP21741 143 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 NANOS3P60323 173 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 ERVK11-1P61568 191 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 ACTA2P62736 377 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 ACTG2P63267 376 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 FDX2Q6P4F2 183 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 SHISA2Q6UWI4 295 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 PNKDQ8N490 385 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 SGMS2Q8NHU3 365 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 TNFRSF14Q92956 283 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 SLAMF9Q96A28 289 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 ADAT3Q96EY9 351 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 MRPL48Q96GC5 212 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 C4orf36Q96KX1 117 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 CEP19Q96LK0 163 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 Q96MT0 163 aa13.73□□□□□ -0.21
CACNA1A-259ENST00000638114 LOC100130705A0A1B0GUX0 176 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 SAA4P35542 130 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 IER3P46695 156 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 UBE2E1P51965 193 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 RPL31P62899 125 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 SLC25A26Q70HW3 274 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 LHFPL3Q86UP9 236 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 ASCC1Q8N9N2 400 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 OR4M1Q8NGD0 313 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 OR5D13Q8NGL4 314 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 RHOXF1Q8NHV9 184 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 STMN2Q93045 179 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 FGGYQ96C11 551 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 PELI1Q96FA3 418 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 MYCBPQ99417 103 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 ALG8Q9BVK2 526 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 DPAGT1Q9H3H5 408 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 AMBNQ9NP70 447 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 FAM118AQ9NWS6 357 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 MTCH1Q9NZJ7 389 aa13.72□□□□□ -0.21
CACNA1A-259ENST00000638114 A0A1W2PPH5 198 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 MEIOCA2RUB1 952 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 POM121CA8CG34 1229 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 ANGPTL7O43827 346 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 PAHP00439 452 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 TK1P04183 234 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 ISG15P05161 165 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 POU3F4P49335 361 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 RBP2P50120 134 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 CCR9P51686 369 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 ATP1B3P54709 279 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 RAG2P55895 527 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 COL10A1Q03692 680 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 GALEQ14376 348 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 TMEM200BQ69YZ2 307 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 ZNF676Q8N7Q3 588 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 OR13C3Q8NGS6 347 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 OR4F5Q8NH21 305 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 DYRK2Q92630 601 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 C1RLQ9NZP8 487 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 ZNRD1Q9P1U0 126 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 HHLA2Q9UM44 414 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 MYRFQ9Y2G1 1151 aa13.71□□□□□ -0.21
CACNA1A-259ENST00000638114 IGKV1-9A0A0C4DH69 117 aa13.7□□□□□ -0.22
CACNA1A-259ENST00000638114 BTBD17A6NE02 478 aa13.7□□□□□ -0.22
CACNA1A-259ENST00000638114 F8VVB4 439 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms