RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CDH24Q86UP0 819 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 LYPD6Q86Y78 171 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 POC1AQ8NBT0 407 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 Q8NFD4 153 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 OR51A2Q8NGJ7 313 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 TBC1D15Q8TC07 691 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 ITLN1Q8WWA0 313 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 AQP3Q92482 292 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 AP3S1Q92572 193 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 TMEM203Q969S6 136 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 PTX4Q96A99 478 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 S100A13Q99584 98 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FOXC2Q99958 501 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 CHCHD6Q9BRQ6 235 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 CST11Q9H112 138 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 OR51I2Q9H344 312 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 GCM1Q9NP62 436 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 GPR173Q9NS66 373 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 TMEM106BQ9NUM4 274 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 RNF7Q9UBF6 113 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FBLN5Q9UBX5 448 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 V9GY05 133 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 LOC100506127A0A0U1RQW1 187 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 FAM230AA0A1W2PPH8 454 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 A6NHS1 94 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 A6NLC8 198 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 IFITM5A6NNB3 132 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 H0YL77 283 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 TRAPPC2LH3BP13 241 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 RP2O75695 350 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 NCR1O76036 304 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 KDM4BO94953 1096 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 LHBP01229 141 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 PGA5P0DJD9 388 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 CALCBP10092 127 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 DAOP14920 347 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 SLC25A16P16260 332 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 HTR2CP28335 458 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 THBS2P35442 1172 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 CDKN1AP38936 164 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 PTGFRP43088 359 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 MAGEB1P43366 347 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 ATP5J2P56134 94 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 ERVK11-1P61568 191 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 PDZK1IP1Q13113 114 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 IL13RA2Q14627 380 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 CTF1Q16619 201 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 DGUOKQ16854 277 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 TEX36Q5VZQ5 186 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 FAM166AQ6J272 317 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 WDR82Q6UXN9 313 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 DNM1P46Q6ZS02 220 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 LCNL1Q6ZST4 164 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 WDR86Q86TI4 376 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 JAGN1Q8N5M9 183 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 SCCPDHQ8NBX0 429 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 ACOT12Q8WYK0 555 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 RAB1CQ92928 201 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 ISOC1Q96CN7 298 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 CEP19Q96LK0 163 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 DMRTB1Q96MA1 342 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 GPER1Q99527 375 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 NRIP2Q9BQI9 281 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 PIMREGQ9BSJ6 248 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 RBM38Q9H0Z9 239 aaKnown RBP5.66□□□□□ -1.5
UPF3B-205ENST00000636792 METTL9Q9H1A3 318 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 OR51E2Q9H255 320 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 HES4Q9HCC6 221 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 SMURF1Q9HCE7 757 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 CCDC59Q9P031 241 aaKnown RBP5.66□□□□□ -1.5
UPF3B-205ENST00000636792 STEAP1Q9UHE8 339 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 ETV7Q9Y603 341 aa5.66□□□□□ -1.5
UPF3B-205ENST00000636792 ANKRD17O75179 2603 aaKnown RBP5.66□□□□□ -1.5
UPF3B-205ENST00000636792 ARID1AO14497 2285 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 IGKV1-27A0A075B6S5 117 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 A0A0A6YYH2 397 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 TRAV38-1A0A0B4J264 116 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 hCG_1807616A0A1W2PRN6 198 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 A6NJ64 397 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 TMEM178BH3BS89 294 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 LGALS8O00214 317 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 AKR7A2O43488 359 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 LMX1BO60663 402 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 KNG1P01042 644 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 IGHV4-39P01824 125 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 HPXP02790 462 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 CSTBP04080 98 aaKnown RBP5.65□□□□□ -1.5
UPF3B-205ENST00000636792 MAS1P04201 325 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 HEXAP06865 529 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 ADRA2CP18825 462 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 SOX6P35712 828 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 MDH2P40926 338 aaKnown RBP5.65□□□□□ -1.5
UPF3B-205ENST00000636792 FGF12P61328 243 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 INSL4Q14641 139 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 ARL6IP1Q15041 203 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 ZNF146Q15072 292 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 MICBQ29980 383 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 MPV17LQ2QL34 196 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 FAM27D1Q5T7N8 215 aa5.65□□□□□ -1.5
UPF3B-205ENST00000636792 SFXN4Q6P4A7 337 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms