RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 NABP1Q96AH0 204 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 AQP10Q96PS8 301 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 CHST5Q9GZS9 411 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 UBE2ZQ9H832 354 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 C1orf123Q9NWV4 160 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 RCC2Q9P258 522 aaKnown RBP12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 CACNA1DQ01668 2161 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 EXPH5Q8NEV8 1989 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 CEP192Q8TEP8 1941 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 M0R036 132 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 TNFSF12O43508 249 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 SGCEO43556 437 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 ZIC3O60481 467 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 IFNA21P01568 189 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 HTR5AP47898 357 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 SRYQ05066 204 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 LPAL2Q16609 132 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 KMT5CQ86Y97 462 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 FAM89BQ8N5H3 189 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 RTN4IP1Q8WWV3 396 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 MAGT1Q9H0U3 335 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 ANXA10Q9UJ72 324 aa12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 RP1L1Q8IWN7 2480 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-228ENST00000636610 MEX3AA1L020 520 aaKnown RBP12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 OR7C1O76099 320 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 ADH6P28332 368 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 CXCL12P48061 93 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 PEA15Q15121 130 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 HIST3H3Q16695 136 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 MIDNQ504T8 468 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 KIAA2026Q5HYC2 2103 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 RAB11FIP2Q7L804 512 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 IP6K3Q96PC2 410 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 PRRX2Q99811 253 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 PARPBPQ9NWS1 579 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 FBLN5Q9UBX5 448 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 HDGFL3Q9Y3E1 203 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 FBXO7Q9Y3I1 522 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 MBPP02686 304 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 GLAP06280 429 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 NAT2P11245 290 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 PRF1P14222 555 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 ZNF32P17041 273 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 RAB13P51153 203 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 CAV2P51636 162 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 IGFBP7Q16270 282 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 HLA-BQ31612 363 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 KRBOX4Q5JUW0 171 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 ZIC4Q8N9L1 334 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 OR14L1PQ8NHC6 308 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 BORCS8Q96FH0 119 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 CHRDQ9H2X0 955 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 OR51B6Q9H340 312 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 SMOC1Q9H4F8 434 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 C19orf25Q9UFG5 118 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 MRPS17Q9Y2R5 130 aaKnown RBP12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 MEMO1Q9Y316 297 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 ZNF175Q9Y473 711 aa12.21□□□□□ -0.45
CACNA1A-228ENST00000636610 IGKV1-12A0A0C4DH73 117 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 LY6G6EA0A0G2JKS1 128 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF98A6NK75 572 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 CXCL13O43927 109 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 IGKV1D-12P01611 117 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 RFPL3SP0C7P2 107 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF728P0DKX0 622 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 SNRPEP62304 92 aaKnown RBP12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 PCOLCEQ15113 449 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF385CQ66K41 422 aaPredicted RBP12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 CD300LFQ8TDQ1 290 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 SSC4DQ8WTU2 575 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 NDRG3Q9UGV2 375 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 U3KQA8 63 aa12.21□□□□□ -0.46
CACNA1A-228ENST00000636610 A0A096LPE4 126 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 IGHV3-64DA0A0J9YX35 117 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 A0A1W2PPZ6 126 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 SERPINE3A8MV23 424 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 ATXN7O15265 892 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 PHF1O43189 567 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 TSPAN15O95858 294 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 ARG1P05089 322 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 PET100P0DJ07 73 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 CCL1P22362 96 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 RGS19P49795 217 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 SLC25A53Q5H9E4 307 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 SPIN3Q5JUX0 258 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 MAML2Q8IZL2 1156 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 OR10AD1Q8NGE0 317 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 SLC25A43Q8WUT9 341 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 KIRREL1Q96J84 757 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF442Q9H7R0 627 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 WFDC1Q9HC57 220 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 ZFP57Q9NU63 452 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 SEMA5BQ9P283 1151 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 FBXO9Q9UK97 447 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 ST3GAL6Q9Y274 331 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 BOD1L1Q8NFC6 3051 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 ONECUT2O95948 504 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 UMODP07911 640 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 OR13C7P0DN81 318 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms