RNA–Protein interactions for RNA: ENST00000636044.1

CHRNA7-209, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-209ENST00000636044 BAMBIQ13145 260 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 CMTM4Q8IZR5 234 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 KIR3DL3Q8N743 410 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 ZNF676Q8N7Q3 588 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 SETD9Q8NE22 299 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 OR51A4Q8NGJ6 313 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 LHX4Q969G2 390 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 BORCS8Q96FH0 119 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 SDSLQ96GA7 329 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 DUX5Q96PT3 197 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 HES4Q9HCC6 221 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 MAB21L2Q9Y586 359 aa16.97■□□□□ 0.31
CHRNA7-209ENST00000636044 MDFIC2A0A1B0GVS7 189 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 A0A1W2PQ09 198 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 CEBPDP49716 269 aaPredicted RBP16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 CAPZA1P52907 286 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 BPIFB3P59826 476 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 MRPL28Q13084 256 aaKnown RBP16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 UTS2BQ765I0 119 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 VMO1Q7Z5L0 202 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 EGFL6Q8IUX8 553 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 DHRSXQ8N5I4 330 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 CD177Q8N6Q3 437 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 GATAD2BQ8WXI9 593 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 FGGYQ96C11 551 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 DMRTB1Q96MA1 342 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 C1orf147Q96MC9 270 aaPredicted RBP16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 JAM3Q9BX67 310 aa16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 ZMAT3Q9HA38 289 aaKnown RBP16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 FGF20Q9NP95 211 aaPredicted RBP16.96■□□□□ 0.31
CHRNA7-209ENST00000636044 IGHV1-69DA0A0B4J2H0 117 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 CENPVL3A0A0U1RRI6 287 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 TMEM212A6NML5 194 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 SLC1A7O00341 560 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 CASQ2O14958 399 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 IGHV1-69P01742 117 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 CCDC159P0C7I6 412 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 LIMS3P0CW19 117 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 LIMS4P0CW20 117 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 ATF1P18846 271 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 PRDX2P32119 198 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 GBX2P52951 348 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 ERVK11-1P61568 191 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 ADARB1P78563 741 aaKnown RBP16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 OGFRL1Q5TC84 451 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 SLC25A26Q70HW3 274 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 ZNF561Q8N587 486 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 DNAAF1Q8NEP3 725 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 SLAMF9Q96A28 289 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 CEP19Q96LK0 163 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 COMMD4Q9H0A8 199 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 OR14J1Q9UGF5 321 aa16.95■□□□□ 0.3
CHRNA7-209ENST00000636044 TRBV23-1A0A0A0MS06 115 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 IGKV1-9A0A0C4DH69 117 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 IRGMA1A4Y4 181 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 E9PI62 339 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 ZFPL1O95159 310 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 KNG1P01042 644 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 OCM2P0CE71 109 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 OCMP0CE72 109 aaPredicted RBP16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 PRKACBP22694 351 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 PRTN3P24158 256 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 AZGP1P25311 298 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 RBP2P50120 134 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 IL18R1Q13478 541 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 DEFB112Q30KQ8 113 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 HAVCR2Q8TDQ0 301 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 ZDHHC16Q969W1 377 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 SPSB1Q96BD6 273 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 SIRT7Q9NRC8 400 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 MTCH1Q9NZJ7 389 aa16.94■□□□□ 0.3
CHRNA7-209ENST00000636044 DCKP27707 260 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 CAPGP40121 348 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 POU3F4P49335 361 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 ATP1B3P54709 279 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 LHFPL2Q6ZUX7 228 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 PDZD9Q8IXQ8 264 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 FAM185AQ8N0U4 392 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 OR5AK2Q8NH90 309 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 GCDHQ92947 438 aaPredicted RBP16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 OPALINQ96PE5 141 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 PDCD1LG2Q9BQ51 273 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 VCXQ9H320 206 aa16.93■□□□□ 0.3
CHRNA7-209ENST00000636044 F8VVB4 439 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 F8VWA3 439 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 INMTO95050 263 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 RPSAP08865 295 aaKnown RBP16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 MYL12AP19105 171 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 ETV1P50549 477 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 MTCP1P56278 107 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 GABPB1Q06547 395 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 SLC9A3R2Q15599 337 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 C12orf54Q6X4T0 127 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 Q8N7P7 452 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 OR13C9Q8NGT0 318 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 TSEN15Q8WW01 171 aaKnown RBP16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 SLC25A28Q96A46 364 aa16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 CAB39Q9Y376 341 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-209ENST00000636044 TRBV2A0A0J9YWF9 115 aa16.91■□□□□ 0.3
CHRNA7-209ENST00000636044 H0YAE9 185 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms