RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TMEM238LA0A1B0GVL6 79 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 A6NJY4 79 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 DEFB108AA8MXU0 73 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 M0R296 226 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 DHHO43323 396 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SPRY1O43609 319 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-209ENST00000635750 RPS4Y1P22090 263 aaKnown RBP4.98□□□□□ -1.61
SCN1A-209ENST00000635750 ACAA2P42765 397 aaKnown RBP4.98□□□□□ -1.61
SCN1A-209ENST00000635750 DIO1P49895 249 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 BTG1P62324 171 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 HIST1H3AP68431 136 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM240Q5SV17 173 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 HES3Q5TGS1 186 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 AFMIDQ63HM1 303 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 CA13Q8N1Q1 262 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 OR10J6PQ8NGY7 276 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 LMO3Q8TAP4 145 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 RAB37Q96AX2 223 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM167BQ9NRX6 74 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 MYO7AQ13402 2215 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 HEATR1Q9H583 2144 aaKnown RBP4.98□□□□□ -1.61
SCN1A-209ENST00000635750 TPRP12270 2363 aaKnown RBP4.98□□□□□ -1.61
SCN1A-209ENST00000635750 LILRA5A6NI73 299 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 CD80P33681 288 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF252P-AS1Q0IIN9 211 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 HERPUD1Q15011 391 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 TM4SF20Q53R12 229 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 FAHD2BQ6P2I3 314 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SLC16A12Q6ZSM3 486 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 DRAXINQ8NBI3 349 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-209ENST00000635750 LRRC29Q8WV35 223 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 FAHD2AQ96GK7 314 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SLC25A33Q9BSK2 321 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 HSD3B7Q9H2F3 369 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 ASCL3Q9NQ33 180 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SMCHD1A6NHR9 2005 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SLC2A10O95528 541 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 BSGP35613 385 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 OR4D9Q8NGE8 314 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 EXTL1Q92935 676 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SLC25A46Q96AG3 418 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 GPR137Q96N19 417 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SPACA5Q96QH8 159 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 RAB40CQ96S21 281 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 HAPLN2Q9GZV7 340 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM202A6NGA9 273 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 CTDSP2O14595 271 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 GPANK1O95872 356 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 ADRB1P08588 477 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 WIPI1Q5MNZ9 446 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SPANXN1Q5VSR9 72 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 C4orf45Q96LM5 186 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 OR2D2Q9H210 308 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 MS4A5Q9H3V2 200 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 NIT2Q9NQR4 276 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 CMC2Q9NRP2 79 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM218A2RU14 115 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 CD37P11049 281 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ECSCRQ19T08 205 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF658BQ4V348 819 aaPredicted RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 CALHM1Q8IU99 346 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 FAM219AQ8IW50 185 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 RTN4IP1Q8WWV3 396 aaPredicted RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 R4GN57 208 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 MYO16Q9Y6X6 1858 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 A0A1W2PRD5 423 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 A0A1W2PRF3 423 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 A0A1W2PRM7 423 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 OOEPA6NGQ2 149 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 K7ESM1 405 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 SSX1Q16384 188 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM215Q68D42 235 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 OR2T2Q6IF00 324 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 FAM53AQ6NSI3 398 aaPredicted RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 NRARPQ7Z6K4 114 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 LYG2Q86SG7 212 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 VRK3Q8IV63 474 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 SNRNP40Q96DI7 357 aaKnown RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 FGF22Q9HCT0 170 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 MED29Q9NX70 200 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 DICER1Q9UPY3 1922 aaKnown RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 POM121BA6NF01 834 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 M0R143 59 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF324O75467 553 aaPredicted RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 BTG2P78543 158 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 OR52I2Q8NH67 350 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 RHOXF1Q8NHV9 184 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 PLPPR2Q96GM1 343 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 METTL26Q96S19 204 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 DOCK2Q92608 1830 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 M0R2Z0 102 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 MFNGO00587 321 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM127O75204 238 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ABLIM3O94929 683 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 P01737 135 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 CDAP32320 146 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 CDX1P47902 265 aaPredicted RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 CACNG7P62955 275 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 RELAQ04206 551 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 PRSS8Q16651 343 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms