RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 PPP1R1AQ13522 171 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 TMEM88Q6PEY1 159 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 TRAT1Q6PIZ9 186 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 ZBTB44Q8NCP5 570 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 NUBPLQ8TB37 319 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 LSM2Q9Y333 95 aaKnown RBP11.38□□□□□ -0.59
SCN8A-209ENST00000627620 C3orf85A0A1B0GTC6 90 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 PDCD6O75340 191 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 TMIGD3P0DMS9 266 aaPredicted RBP11.38□□□□□ -0.59
SCN8A-209ENST00000627620 TEX261Q6UWH6 196 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 NUFIP2Q7Z417 695 aaKnown RBP11.38□□□□□ -0.59
SCN8A-209ENST00000627620 DHRS9Q9BPW9 319 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 RAB18Q9NP72 206 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 RASL12Q9NYN1 266 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 GOLT1BQ9Y3E0 138 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 U3KQ87 197 aa11.38□□□□□ -0.59
SCN8A-209ENST00000627620 ACSM4P0C7M7 580 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 RAB7AP51149 207 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 SOX8P57073 446 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 AANATQ16613 207 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 OR6X1Q8NH79 312 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 AAMDCQ9H7C9 122 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 CACNA1CQ13936 2221 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 C3orf80F5H4A9 247 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 DHRS2Q13268 280 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 SLC24A4Q8NFF2 622 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 OR8D4Q8NGM9 314 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 ASB10Q8WXI3 467 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 RP1L1Q8IWN7 2480 aaPredicted RBP11.37□□□□□ -0.59
SCN8A-209ENST00000627620 LRRC3CA6NJW4 275 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 SOX15O60248 233 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 TOX4O94842 621 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 SMIM17P0DL12 118 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 CALCRP30988 508 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 ETFDHQ16134 617 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 TMEM211Q6ICI0 200 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 OR2Y1Q8NGV0 311 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 LURAP1Q96LR2 239 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 RASL10BQ96S79 203 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 GAL3ST2Q9H3Q3 398 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 ZNF768Q9H5H4 540 aaKnown RBP11.37□□□□□ -0.59
SCN8A-209ENST00000627620 CST4P01036 141 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 S100A4P26447 101 aaKnown RBP11.37□□□□□ -0.59
SCN8A-209ENST00000627620 RAC3P60763 192 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 FFAR4Q5NUL3 377 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 MUC20Q8N307 709 aaPredicted RBP11.37□□□□□ -0.59
SCN8A-209ENST00000627620 OR5D13Q8NGL4 314 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 OR2D2Q9H210 308 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 TCFL5Q9UL49 500 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 RNF24Q9Y225 148 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 BRWD1Q9NSI6 2320 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 MYO5AQ9Y4I1 1855 aaKnown RBP11.37□□□□□ -0.59
SCN8A-209ENST00000627620 GOSR1O95249 250 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 FAM3AP98173 230 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 SLC38A11Q08AI6 406 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 ST3GAL2Q16842 350 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 WDFY2Q96P53 400 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 CDK5RAP2Q96SN8 1893 aa11.37□□□□□ -0.59
SCN8A-209ENST00000627620 RNASEK-C17orf49H0YIS7 233 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 COX7A1P24310 79 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 SCAND1P57086 179 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 NTNG2Q96CW9 530 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 RAB40CQ96S21 281 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 OR2M5A3KFT3 312 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 SPP1P10451 314 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 PJVKQ0ZLH3 352 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 CD226Q15762 336 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 MIDNQ504T8 468 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 ZBTB37Q5TC79 503 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 WDR74Q6RFH5 385 aaPredicted RBP11.36□□□□□ -0.59
SCN8A-209ENST00000627620 NPEPL1Q8NDH3 523 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 MRGPRDQ8TDS7 321 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 KIAA1551Q9HCM1 1747 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 hADV38S2A0JD32 116 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 OR2J3O76001 311 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 S100A8P05109 93 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 FGF2P09038 288 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 SFTA3P0C7M3 94 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 PRSS12P56730 875 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 C21orf58P58505 322 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 BCL2L2Q92843 193 aaPredicted RBP11.36□□□□□ -0.59
SCN8A-209ENST00000627620 PIK3IP1Q96FE7 263 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 CXXC4Q9H2H0 198 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 ASCC3Q8N3C0 2202 aaKnown RBP11.36□□□□□ -0.59
SCN8A-209ENST00000627620 C9orf170A2RU37 121 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 CCL4P13236 92 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 ACSM6Q6P461 480 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 NHLRC1Q6VVB1 395 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 Q7L0L9 218 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 ZNF429Q86V71 674 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 CRYBA1P05813 215 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 SDHBP21912 280 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 OIT3Q8WWZ8 545 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 TMEM18Q96B42 140 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 CDX2Q99626 313 aaPredicted RBP11.36□□□□□ -0.59
SCN8A-209ENST00000627620 TMEM147Q9BVK8 224 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 NAA60Q9H7X0 242 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 IL36GQ9NZH8 169 aa11.36□□□□□ -0.59
SCN8A-209ENST00000627620 MRM2Q9UI43 246 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms