RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 DUSP15Q9H1R2 295 aaPredicted RBP7.65□□□□□ -1.18
VCL-207ENST00000624354 B3GAT1Q9P2W7 334 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 AHCTF1Q8WYP5 2266 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 SHISA8B8ZZ34 492 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 CST4P01036 141 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 MBP02144 154 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 NR2C1P13056 603 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 G0S2P27469 103 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 CDAP32320 146 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 ZNF84P51523 738 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 ZNF41P51814 821 aaPredicted RBP7.65□□□□□ -1.19
VCL-207ENST00000624354 CHRFAM7AQ494W8 412 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 PDZD11Q5EBL8 140 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 ZNF574Q6ZN55 896 aaPredicted RBP7.65□□□□□ -1.19
VCL-207ENST00000624354 ZNF610Q8N9Z0 462 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 EIF5A2Q9GZV4 153 aaKnown RBP7.65□□□□□ -1.19
VCL-207ENST00000624354 BCO1Q9HAY6 547 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 C1orf123Q9NWV4 160 aa7.65□□□□□ -1.19
VCL-207ENST00000624354 ZNF587BE7ETH6 402 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 K7EPK0 472 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 RER1O15258 196 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 JTBO76095 146 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 HKR1P10072 659 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 FOLR1P15328 257 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 RPS2P15880 293 aaKnown RBP7.64□□□□□ -1.19
VCL-207ENST00000624354 RAB4AP20338 218 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 BLVRBP30043 206 aaPredicted RBP7.64□□□□□ -1.19
VCL-207ENST00000624354 RPL12P30050 165 aaKnown RBP7.64□□□□□ -1.19
VCL-207ENST00000624354 MAS1LP35410 378 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 NHLH2Q02577 135 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 MYBPHQ13203 477 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 IAH1Q2TAA2 248 aaPredicted RBP7.64□□□□□ -1.19
VCL-207ENST00000624354 ANKRD39Q53RE8 183 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 CARD17Q5XLA6 110 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 FAM57BQ71RH2 274 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 FAM71E2Q8N5Q1 922 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 PLPP5Q8NEB5 264 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 RHBDD1Q8TEB9 315 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 GPR61Q9BZJ8 451 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 KLRF1Q9NZS2 232 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 ZNF319Q9P2F9 582 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 PCNX3Q9H6A9 2034 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 PGA4P0DJD7 388 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 PGA3P0DJD8 388 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 ZNF17P17021 662 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 OR1D5P58170 312 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 MFAP5Q13361 173 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 ARL6IP1Q15041 203 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 GUK1Q16774 197 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 HIST2H3PS2Q5TEC6 136 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 PLXDC1Q8IUK5 500 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 FAM89BQ8N5H3 189 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 OR5D18Q8NGL1 313 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 OR6X1Q8NH79 312 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 MR1Q95460 341 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 CNTNAP3Q9BZ76 1288 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 METTL9Q9H1A3 318 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 SMOC1Q9H4F8 434 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 UBE2ZQ9H832 354 aaPredicted RBP7.64□□□□□ -1.19
VCL-207ENST00000624354 ATG2AQ2TAZ0 1938 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 PI4KAP42356 2102 aa7.64□□□□□ -1.19
VCL-207ENST00000624354 LMO7DNF2Z398 122 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 CCL1P22362 96 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 FOXL2P58012 376 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 HNRNPKP61978 463 aaKnown RBP eCLIP7.63□□□□□ -1.19
VCL-207ENST00000624354 KISS1Q15726 138 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 KHDC3LQ587J8 217 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 SPNS3Q6ZMD2 512 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 D2HGDHQ8N465 521 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 FNDC9Q8TBE3 224 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 CYYR1Q96J86 154 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 MRGPRX4Q96LA9 322 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 KCNJ16Q9NPI9 418 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.63□□□□□ -1.194e-6■■■□□ 15.2
VCL-207ENST00000624354 ZNF701Q9NV72 531 aaPredicted RBP7.63□□□□□ -1.19
VCL-207ENST00000624354 MMP24Q9Y5R2 645 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 LAMA5O15230 3695 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 ELOA3CA0A087WX78 387 aaPredicted RBP7.63□□□□□ -1.19
VCL-207ENST00000624354 IGKV1-9A0A0C4DH69 117 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 OR5H15A6NDH6 313 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 OR5H1A6NKK0 313 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 SERPINE3A8MV23 424 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 MKRN2OSH3BPM6 223 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 IFNA21P01568 189 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 OPN1LWP04000 364 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 ZNF708P17019 499 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 RPS23P62266 143 aaKnown RBP7.63□□□□□ -1.19
VCL-207ENST00000624354 NKX6-1P78426 367 aaPredicted RBP7.63□□□□□ -1.19
VCL-207ENST00000624354 DMRTC1Q5HYR2 192 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 TMEM268Q5VZI3 342 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 OGFOD3Q6PK18 319 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 SGPP2Q8IWX5 399 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 CARFQ8N187 725 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 APCDD1LQ8NCL9 501 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 NPRL2Q8WTW4 380 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 RAB24Q969Q5 203 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 GALNT14Q96FL9 552 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 POM121Q96HA1 1249 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 AMDHD2Q9Y303 409 aa7.63□□□□□ -1.19
VCL-207ENST00000624354 STARD10Q9Y365 291 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms