RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 BEX1Q9HBH7 125 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 ELF5Q9UKW6 265 aaPredicted RBP14.08□□□□□ -0.16
LDB3-208ENST00000623007 ST3GAL6Q9Y274 331 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 TRAPPC2LH3BP13 241 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 SPRY1O43609 319 aaPredicted RBP14.07□□□□□ -0.16
LDB3-208ENST00000623007 GLAP06280 429 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 FUT3P21217 361 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 CHATP28329 748 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 WNT5AP41221 380 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 GMFBP60983 142 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 FGF12P61328 243 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 ATPAF1Q5TC12 328 aaPredicted RBP14.07□□□□□ -0.16
LDB3-208ENST00000623007 GVQW1Q8N7I0 195 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 ASCC1Q8N9N2 400 aaKnown RBP14.07□□□□□ -0.16
LDB3-208ENST00000623007 OR2AK2Q8NG84 335 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 OR13C8Q8NGS7 320 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 MICU1Q9BPX6 476 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 SLX1AQ9BQ83 275 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 RTL8AQ9BWD3 113 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 SFXN3Q9BWM7 321 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 DLL4Q9NR61 685 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 GPR160Q9UJ42 338 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 K7ENP7 123 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 ANGPTL7O43827 346 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 GFRA3O60609 400 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 SMPD2O60906 423 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 LYZL6O75951 148 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 VSIG10L2P0DP72 767 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 CCL2P13500 99 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 CXCL3P19876 107 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 DNASE1P24855 282 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 FPR2P25090 351 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 PPP1CBP62140 327 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 IL24Q13007 206 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 MICBQ29980 383 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 TMEM211Q6ICI0 200 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 OR52W1Q6IF63 320 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 SLC25A26Q70HW3 274 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 MED12LQ86YW9 2145 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 C12orf45Q8N5I9 185 aaPredicted RBP14.07□□□□□ -0.16
LDB3-208ENST00000623007 FAM57AQ8TBR7 257 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 GTF3AQ92664 365 aaKnown RBP14.07□□□□□ -0.16
LDB3-208ENST00000623007 CMSS1Q9BQ75 279 aaKnown RBP14.07□□□□□ -0.16
LDB3-208ENST00000623007 SCNM1Q9BWG6 230 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 PPA2Q9H2U2 334 aa14.07□□□□□ -0.16
LDB3-208ENST00000623007 RIMS4Q9H426 269 aaPredicted RBP14.07□□□□□ -0.16
LDB3-208ENST00000623007 FREM1Q5H8C1 2179 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 ZNF732B4DXR9 585 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 TNFSF13O75888 250 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 NGFP01138 241 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 CGAP01215 116 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 HAAOP46952 286 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 FGL1Q08830 312 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 MZT1Q08AG7 82 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 TAF9Q16594 264 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 NKPD1Q17RQ9 610 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 TMED4Q7Z7H5 227 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 SPACA3Q8IXA5 215 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 FBXL14Q8N1E6 418 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 STARD4Q96DR4 205 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 PHB2Q99623 299 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 TMPRSS13Q9BYE2 586 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 ZNF71Q9NQZ8 489 aaPredicted RBP14.06□□□□□ -0.16
LDB3-208ENST00000623007 POLDIP2Q9Y2S7 368 aa14.06□□□□□ -0.16
LDB3-208ENST00000623007 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.05□□□□□ -0.16
LDB3-208ENST00000623007 TMEM210A6NLX4 147 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 IDH3GP51553 393 aaPredicted RBP14.05□□□□□ -0.16
LDB3-208ENST00000623007 UCP2P55851 309 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 ARPC4P59998 168 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 IL13RA2Q14627 380 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 HLXQ14774 488 aaPredicted RBP14.05□□□□□ -0.16
LDB3-208ENST00000623007 TMEM128Q5BJH2 165 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 NKAPLQ5M9Q1 402 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 RFPL4BQ6ZWI9 263 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 OVCH2Q7RTZ1 564 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 C6orf201Q7Z4U5 140 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 LYG2Q86SG7 212 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 MUC20Q8N307 709 aaPredicted RBP14.05□□□□□ -0.16
LDB3-208ENST00000623007 TMEM185AQ8NFB2 350 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 OR2T35Q8NGX2 323 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 HPSE2Q8WWQ2 592 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 ST6GALNAC5Q9BVH7 336 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 C12orf4Q9NQ89 552 aa14.05□□□□□ -0.16
LDB3-208ENST00000623007 ZNF701Q9NV72 531 aaPredicted RBP14.05□□□□□ -0.16
LDB3-208ENST00000623007 A0A0B4J2A0 478 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 IGKV1-12A0A0C4DH73 117 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 OR5H1A6NKK0 313 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 IQCF6A8MYZ5 107 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 PLATP00750 562 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 IGKV1D-12P01611 117 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 HLA-AP01891 365 aaKnown RBP14.04□□□□□ -0.16
LDB3-208ENST00000623007 PMP2P02689 132 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 CSN2P05814 226 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 HLA-GP17693 338 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 GPM6AP51674 278 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 PLEKHN1Q494U1 663 aaPredicted RBP14.04□□□□□ -0.16
LDB3-208ENST00000623007 VWA1Q6PCB0 445 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 BHLHA15Q7RTS1 189 aaPredicted RBP14.04□□□□□ -0.16
LDB3-208ENST00000623007 LHFPL1Q86WI0 220 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 SPERTQ8NA61 448 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms