RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 CDKN1BP46527 198 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 NCBP2P52298 156 aaKnown RBP eCLIP4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 ACTA2P62736 377 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 ACTG2P63267 376 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 ACTC1P68032 377 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 ACTA1P68133 377 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 TMEM183BQ1AE95 376 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 RAET1LQ5VY80 246 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 PRMT9Q6P2P2 845 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 SHISA6Q6ZSJ9 500 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 PEX26Q7Z412 305 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 TMEM183AQ8IXX5 376 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 ACTRT1Q8TDG2 376 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 PHF10Q8WUB8 498 aaKnown RBP4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 C8orf44Q96CB5 159 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 SH3GL3Q99963 347 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 SELENOSQ9BQE4 189 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 FAM192AQ9GZU8 254 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 FAM96AQ9H5X1 160 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 RPF2Q9H7B2 306 aaKnown RBP4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 ANKRA2Q9H9E1 313 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 FGF20Q9NP95 211 aaPredicted RBP4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 ZNF282Q9UDV7 671 aaPredicted RBP4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 SHPKQ9UHJ6 478 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 ZNF835Q9Y2P0 537 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 HYOU1Q9Y4L1 999 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 ARHGAP21Q5T5U3 1957 aa4.1□□□□□ -1.75
LPCAT3-213ENST00000620843 NF1P21359 2839 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 PCNX1Q96RV3 2341 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 CIB4A0PJX0 185 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 SMCO3A2RU48 225 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 OR51F1A6NGY5 319 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 F6UB75 175 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 H7C0C1 242 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 C19orf84I3L1E1 186 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 RAB29O14966 203 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 SS18L1O75177 396 aaPredicted RBP4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 EEDO75530 441 aaKnown RBP4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 CLIC3O95833 236 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 IGLV2-23P01705 113 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 BGLAPP02818 100 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 ANXA5P08758 320 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 OR56A5P0C7T3 313 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 CD9P21926 228 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 MSNP26038 577 aaKnown RBP4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 PSMB5P28074 263 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 CCR7P32248 378 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 ATP5OP48047 213 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 RFX3P48380 749 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 TPM4P67936 248 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 ECH1Q13011 328 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 PRPSAP1Q14558 356 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 TMED2Q15363 201 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 RSPO1Q2MKA7 263 aaPredicted RBP4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 CARD17Q5XLA6 110 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 ANKRD26P1Q6NSI1 321 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 XKRXQ6PP77 449 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 TMEM205Q6UW68 189 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 NDUFAF7Q7L592 441 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 GTPBP8Q8N3Z3 284 aaPredicted RBP4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 LIX1Q8N485 282 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 OR7G2Q8NG99 324 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 ACTL9Q8TC94 416 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 LRRC45Q96CN5 670 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 LINC00167Q96N53 147 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 GOLPH3Q9H4A6 298 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 C3orf18Q9UK00 162 aa4.09□□□□□ -1.75
LPCAT3-213ENST00000620843 POLQO75417 2590 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 IGKV1-8A0A0C4DH67 115 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 C9JVG2 144 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 CDC7O00311 574 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 LSM1O15116 133 aaKnown RBP4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 CLOCKO15516 846 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 OR2J3O76001 311 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 SMIM10L1P0DMW3 83 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 TMED10P49755 219 aaKnown RBP4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 SSR4P51571 173 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 VSX2P58304 361 aaPredicted RBP4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 EIF3EP60228 445 aaKnown RBP4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 POU6F1Q14863 301 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 RCN1Q15293 331 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 TTLL9Q3SXZ7 439 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 TMEM255AQ5JRV8 349 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 METAP1DQ6UB28 335 aaPredicted RBP4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 NAV3Q8IVL0 2385 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 MREGQ8N565 214 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 EXPH5Q8NEV8 1989 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 SRSF12Q8WXF0 261 aaKnown RBP4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 PEX13Q92968 403 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 SMIM10Q96HG1 83 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 TSSK3Q96PN8 268 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 P2RX4Q99571 388 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 SLC29A1Q99808 456 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 RACGAP1Q9H0H5 632 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 IFNKQ9P0W0 207 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 PITPNC1Q9UKF7 332 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 ING4Q9UNL4 249 aa4.08□□□□□ -1.76
LPCAT3-213ENST00000620843 PLAC8L1A1L4L8 177 aa4.07□□□□□ -1.76
LPCAT3-213ENST00000620843 PRMT5O14744 637 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms