RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PLEKHA1Q9HB21 404 aa14.03□□□□□ -0.16
HMGN3-203ENST00000620514 USE1Q9NZ43 259 aa14.03□□□□□ -0.16
HMGN3-203ENST00000620514 CAB39Q9Y376 341 aaPredicted RBP14.03□□□□□ -0.16
HMGN3-203ENST00000620514 TRRAPQ9Y4A5 3859 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 LOC107986453A0A1B0GWG9 222 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 E9PQ18 207 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 F8VVB4 439 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 F8VWA3 439 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 SLC1A7O00341 560 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 INMTO95050 263 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 IL24Q13007 206 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 BLMHQ13867 455 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 NCR3LG1Q68D85 454 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 CCDC121Q6ZUS5 278 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 MKXQ8IYA7 352 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 CBR4Q8N4T8 237 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 ZNF561Q8N587 486 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 C17orf50Q8WW18 174 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 TRUB1Q8WWH5 349 aaKnown RBP14.02□□□□□ -0.17
HMGN3-203ENST00000620514 RNFT2Q96EX2 444 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 MBOAT4Q96T53 435 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 ADI1Q9BV57 179 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 PKIBQ9C010 78 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 SLC7A11Q9UPY5 501 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 ORC6Q9Y5N6 252 aa14.02□□□□□ -0.17
HMGN3-203ENST00000620514 A0A1B0GUS0 222 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 CLPSL1A2RUU4 121 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 J3QRE1 110 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 ANGPTL7O43827 346 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 ALDH3A2P51648 485 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 KRTAP10-3P60369 221 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 ERVFRD-1P60508 538 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 SNRPGP62308 76 aaKnown RBP14.01□□□□□ -0.17
HMGN3-203ENST00000620514 RPL31P62899 125 aaKnown RBP14.01□□□□□ -0.17
HMGN3-203ENST00000620514 TMEM200BQ69YZ2 307 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 FAM220AQ7Z4H9 259 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 C11orf42Q8N5U0 333 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 OR2G2Q8NGZ5 317 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 SLAMF9Q96A28 289 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 CHST5Q9GZS9 411 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 MTCH1Q9NZJ7 389 aa14.01□□□□□ -0.17
HMGN3-203ENST00000620514 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.01□□□□□ -0.17
HMGN3-203ENST00000620514 PAHP00439 452 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 TK1P04183 234 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 CCL3L1P16619 93 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 OR12D2P58182 307 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 RPL15P61313 204 aaKnown RBP14□□□□□ -0.17
HMGN3-203ENST00000620514 ACSM1Q08AH1 577 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 ZNF273Q14593 569 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 OCLNQ16625 522 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 SLC25A30Q5SVS4 291 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 ZFP1Q6P2D0 407 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 C17orf107Q6ZR85 190 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 OR5D13Q8NGL4 314 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 LINC01006Q8NI28 216 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 ADAT3Q96EY9 351 aaPredicted RBP14□□□□□ -0.17
HMGN3-203ENST00000620514 AJUBAQ96IF1 538 aa14□□□□□ -0.17
HMGN3-203ENST00000620514 SF3B6Q9Y3B4 125 aaKnown RBP14□□□□□ -0.17
HMGN3-203ENST00000620514 DAPL1A0PJW8 107 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 GATBO75879 557 aaKnown RBP13.99□□□□□ -0.17
HMGN3-203ENST00000620514 UBCP0CG48 685 aaKnown RBP13.99□□□□□ -0.17
HMGN3-203ENST00000620514 PIPP12273 146 aaPredicted RBP13.99□□□□□ -0.17
HMGN3-203ENST00000620514 PAX6P26367 422 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 FUT6P51993 359 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 NANOS3P60323 173 aaKnown RBP13.99□□□□□ -0.17
HMGN3-203ENST00000620514 COL10A1Q03692 680 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 GDPGP1Q6ZNW5 385 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 Q6ZSV7 163 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 SLC25A26Q70HW3 274 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 CCDC54Q8NEL0 328 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 BORCS8Q96FH0 119 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 CEP19Q96LK0 163 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 FRRS1LQ9P0K9 344 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 VPREB3Q9UKI3 123 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 RNF114Q9Y508 228 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 PKD1L1Q8TDX9 2849 aa13.99□□□□□ -0.17
HMGN3-203ENST00000620514 IGKV1-9A0A0C4DH69 117 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 MEX3AA1L020 520 aaKnown RBP13.98□□□□□ -0.17
HMGN3-203ENST00000620514 BTBD17A6NE02 478 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 K7N7A8 449 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 SLC16A6O15403 523 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 SERPINA3P01011 423 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 GABRB1P18505 474 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 COX7A1P24310 79 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 ACTC1P68032 377 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 ACTA1P68133 377 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 MEDAGQ5VYS4 303 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 ASCC1Q8N9N2 400 aaKnown RBP13.98□□□□□ -0.17
HMGN3-203ENST00000620514 ZSCAN4Q8NAM6 433 aaPredicted RBP13.98□□□□□ -0.17
HMGN3-203ENST00000620514 BEND2Q8NDZ0 799 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 OR10AC1Q8NH08 325 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 LGALS12Q96DT0 336 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 SLC29A1Q99808 456 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 FAM234AQ9H0X4 552 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 IL36RNQ9UBH0 155 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 GMPPBQ9Y5P6 360 aa13.98□□□□□ -0.17
HMGN3-203ENST00000620514 H3BUX3 64 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 J3QLW9 94 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 ZNF737O75373 536 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 ZNF19P17023 458 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms