RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 FMODQ06828 376 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 CHAF1BQ13112 559 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 GNMTQ14749 295 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 PPA1Q15181 289 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 AWAT1Q58HT5 328 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 FAM166AQ6J272 317 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 HOGA1Q86XE5 327 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 MISPQ8IVT2 679 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 NFAM1Q8NET5 270 aaPredicted RBP6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 OR4A4PQ8NGN8 299 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 OR1J1Q8NGS3 322 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 ROBO4Q8WZ75 1007 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 TOMM40LQ969M1 308 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 AQP10Q96PS8 301 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 WDR77Q9BQA1 342 aaPredicted RBP6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 SDHAF3Q9NRP4 125 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 MYOTQ9UBF9 498 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 PUS1Q9Y606 427 aaKnown RBP eCLIP6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 FER1L5A0AVI2 2057 aa6.15□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF726A6NNF4 738 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 C17orf51A8MQB3 221 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 LINC00587B1AMM8 73 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 MASP2O00187 686 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 TLX3O43711 291 aaPredicted RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 CELA2AP08217 269 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 CD63P08962 238 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 EIF2S3P41091 472 aaKnown RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 DEFA6Q01524 100 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 EIF3IQ13347 325 aaKnown RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 SOHLH1Q5JUK2 328 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 TIPARPQ7Z3E1 657 aaKnown RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 BIVMQ86UB2 503 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 COMMD1Q8N668 190 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 PRSS33Q8NF86 280 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 OR5D18Q8NGL1 313 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 OR51F2Q8NH61 342 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 CT55Q8WUE5 264 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 ISOC2Q96AB3 205 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 DDIT4LQ96D03 193 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 PGAM5Q96HS1 289 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 COL25A1Q9BXS0 654 aaPredicted RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 PTGES2Q9H7Z7 377 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 PARP11Q9NR21 331 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 SERINC1Q9NRX5 453 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 HS3ST3B1Q9Y662 390 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 SDK2Q58EX2 2172 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 IGLV1-36A0A0B4J1U3 117 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 MSGN1A6NI15 193 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF850A8MQ14 1090 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 SIAH2O43255 324 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 TSPAN2O60636 221 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 KLF7O75840 302 aaPredicted RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 ACAA1P09110 424 aaPredicted RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 CD37P11049 281 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 SLC2A1P11166 492 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 IGFBP3P17936 291 aaPredicted RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 LPAR6P43657 344 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 KIAA0141Q14154 515 aaPredicted RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 GUK1Q16774 197 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 MIDNQ504T8 468 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 CARD17Q5XLA6 110 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 RTL6Q6ICC9 239 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 HIST2H3AQ71DI3 136 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 H1FNTQ75WM6 255 aaPredicted RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 FAM219AQ8IW50 185 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 Q8NFD4 153 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 PRRX2Q99811 253 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 PLEKHA2Q9HB19 425 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 TMEM100Q9NV29 134 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 VSX1Q9NZR4 365 aaPredicted RBP6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 FBXL17Q9UF56 701 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 TCFL5Q9UL49 500 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 VDAC3Q9Y277 283 aa6.15□□□□□ -1.43
SRGAP3-213ENST00000618999 C7orf77A4D0Y5 90 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 C9orf172C9J069 976 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 PLPP3O14495 311 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 LMX1BO60663 402 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 ONECUT2O95948 504 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 ISG15P05161 165 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 UMODP07911 640 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 RCC1P18754 421 aaPredicted RBP6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 SERPINA2P20848 420 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 SULT1A2P50226 295 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 BIDP55957 195 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 EXT1Q16394 746 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 TMPPEQ6ZT21 453 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 RNF166Q96A37 237 aaPredicted RBP6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 FBXO17Q96EF6 278 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 RRNAD1Q96FB5 475 aaKnown RBP6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 LIN37Q96GY3 246 aaPredicted RBP6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 WNT10AQ9GZT5 417 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 TMPRSS5Q9H3S3 457 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 MOB1AQ9H8S9 216 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 PLEKHJ1Q9NW61 149 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 MED29Q9NX70 200 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 FOXJ2Q9P0K8 574 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 GHRLQ9UBU3 117 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 GPR132Q9UNW8 380 aa6.14□□□□□ -1.43
SRGAP3-213ENST00000618999 FBXO7Q9Y3I1 522 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms