RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 GPR160Q9UJ42 338 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 KLF13Q9Y2Y9 288 aaPredicted RBP10.76□□□□□ -0.69
CIITA-212ENST00000618207 MRPS18CQ9Y3D5 142 aaKnown RBP10.76□□□□□ -0.69
CIITA-212ENST00000618207 IGKV1-12A0A0C4DH73 117 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 GEMIN2O14893 280 aaKnown RBP10.76□□□□□ -0.69
CIITA-212ENST00000618207 IFNA7P01567 189 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 IGKV1D-12P01611 117 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 GLRA1P23415 457 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 ZBTB25P24278 435 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 NUBP1P53384 320 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 CHRFAM7AQ494W8 412 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 HIKESHIQ53FT3 197 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 ZNF766Q5HY98 468 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 TOR2AQ5JU69 321 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 TMUB2Q71RG4 321 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 COQ8AQ8NI60 647 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 METTL9Q9H1A3 318 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 RDH8Q9NYR8 311 aa10.76□□□□□ -0.69
CIITA-212ENST00000618207 AKAP13Q12802 2813 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 OR5H14A6NHG9 310 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 EFSO43281 561 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 NME2P1O60361 137 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 NME2P22392 152 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 S100A11P31949 105 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 ATP1B3P54709 279 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 RAB1AP62820 205 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 GK2Q14410 553 aaPredicted RBP10.75□□□□□ -0.69
CIITA-212ENST00000618207 C3P1Q6ZMU1 363 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 ZNF546Q86UE3 836 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 CALHM1Q8IU99 346 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 FBXL14Q8N1E6 418 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 OR56B2PQ8NGI1 322 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 COQ3Q9NZJ6 369 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 EDARQ9UNE0 448 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 MAB21L2Q9Y586 359 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 GTF3C1Q12789 2109 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 TRAV14DV4A0A0A6YYC5 116 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 IGHV3-64DA0A0J9YX35 117 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 hCG_38984A0A1B0GV85 526 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 DHRS7CA6NNS2 312 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 GLI4P10075 376 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 PGAM2P15259 253 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 WT1P19544 449 aaPredicted RBP10.75□□□□□ -0.69
CIITA-212ENST00000618207 GMFBP60983 142 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 CNN3Q15417 329 aaKnown RBP10.75□□□□□ -0.69
CIITA-212ENST00000618207 FAM89BQ8N5H3 189 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 OR51F2Q8NH61 342 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 PPP1R1CQ8WVI7 109 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 C5orf66Q9H5L9 145 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 PARPBPQ9NWS1 579 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 SLC2A8Q9NY64 477 aa10.75□□□□□ -0.69
CIITA-212ENST00000618207 KIAA2026Q5HYC2 2103 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 HSPB6O14558 160 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 ADAP1O75689 374 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 NPBWR2P48146 333 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 SPATA46Q5T0L3 261 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 SLC25A26Q70HW3 274 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 MDS2Q8NDY4 140 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 OR5M8Q8NGP6 311 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 OR13G1Q8NGZ3 307 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 PHB2Q99623 299 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 ACKR4Q9NPB9 350 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 COMMD9Q9P000 198 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 ZNF107Q9UII5 783 aaPredicted RBP10.74□□□□□ -0.69
CIITA-212ENST00000618207 NBEAQ8NFP9 2946 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 MPTX1A8MV57 137 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 LEUTXA8MZ59 168 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 C5orf24Q7Z6I8 188 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 HOGA1Q86XE5 327 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 FDCSPQ8NFU4 85 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 Q96M66 194 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 PPA2Q9H2U2 334 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 ZNF552Q9H707 407 aaPredicted RBP10.74□□□□□ -0.69
CIITA-212ENST00000618207 SPRR3Q9UBC9 169 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 SLC7A11Q9UPY5 501 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 ST3GAL6Q9Y274 331 aa10.74□□□□□ -0.69
CIITA-212ENST00000618207 INTS1Q8N201 2190 aaKnown RBP10.74□□□□□ -0.69
CIITA-212ENST00000618207 ACACAQ13085 2346 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 PIEZO2Q9H5I5 2752 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 TRGV5A0A0B4J1U4 118 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
CIITA-212ENST00000618207 DUSP1P28562 367 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 RAB14P61106 215 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 TOMM40LQ969M1 308 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 SPSB1Q96BD6 273 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 SULT4A1Q9BR01 284 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 OCSTAMPQ9BR26 566 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 GHRLQ9UBU3 117 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 AK3Q9UIJ7 227 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 STARD10Q9Y365 291 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 KLF2Q9Y5W3 355 aaPredicted RBP10.73□□□□□ -0.69
CIITA-212ENST00000618207 HEATR1Q9H583 2144 aaKnown RBP10.73□□□□□ -0.69
CIITA-212ENST00000618207 IGKV3D-15A0A087WSY6 115 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 RP2O75695 350 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 OR7C1O76099 320 aaPredicted RBP10.73□□□□□ -0.69
CIITA-212ENST00000618207 GPM6AP51674 278 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 TSC22D1Q15714 1073 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 PNLIPRP3Q17RR3 467 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 TMEM17Q86X19 198 aa10.73□□□□□ -0.69
CIITA-212ENST00000618207 FOXRED2Q8IWF2 684 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms