RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 OGFOD3Q6PK18 319 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 C9orf40Q8IXQ3 194 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 GPBAR1Q8TDU6 330 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 GALNT14Q96FL9 552 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 TXNIPQ9H3M7 391 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 CD207Q9UJ71 328 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 SLC7A11Q9UPY5 501 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 LDLRAD4O15165 306 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 IGFBP3P17936 291 aaPredicted RBP11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 SLC25A24Q6NUK1 477 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 ABHD5Q8WTS1 349 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 MAGT1Q9H0U3 335 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 NKX2-4Q9H2Z4 354 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 KLRF1Q9NZS2 232 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 F5H5K5 113 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 ADAM10O14672 748 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 CNOT4O95628 575 aaKnown RBP11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 PTBP3O95758 552 aaKnown RBP11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 HIST1H1DP16402 221 aaKnown RBP11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 FPR2P25090 351 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 TNFRSF4P43489 277 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 RND3P61587 244 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 FBXW12Q6X9E4 464 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 Q7L0L9 218 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 LYZL2Q7Z4W2 148 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 OR5L1Q8NGL2 311 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 SLAMF6Q96DU3 332 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 MALSU1Q96EH3 234 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 HDHD3Q9BSH5 251 aaPredicted RBP11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 VN1R1Q9GZP7 353 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 NXT1Q9UKK6 140 aaKnown RBP11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 GAB2Q9UQC2 676 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 AHCTF1Q8WYP5 2266 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 SPTY2D1-AS1A0A0U1RR47 76 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 ZNF850A8MQ14 1090 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 MBPP02686 304 aaPredicted RBP11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 RPL23AP62750 156 aaKnown RBP11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 SGCBQ16585 318 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 ISXQ2M1V0 245 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 BRICD5Q6PL45 260 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 FAM57BQ71RH2 274 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 ZNF664Q8N3J9 261 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 NKAIN3Q8N8D7 197 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 GABRG3Q99928 467 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 LPAR5Q9H1C0 372 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 SIRT7Q9NRC8 400 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 CBLN4Q9NTU7 201 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 ZNF107Q9UII5 783 aaPredicted RBP11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 AK3Q9UIJ7 227 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 WSB1Q9Y6I7 421 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 PTPRSQ13332 1948 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 RALGAPA1Q6GYQ0 2036 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 A0A0A6YYD4 124 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 IGLV1-36A0A0B4J1U3 117 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 ZFP92A6NM28 416 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 TNFRSF10CO14798 259 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 RER1O15258 196 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 DEDDO75618 318 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 PGA3P0DJD8 388 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 TMEM50BP56557 158 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 OR1D5P58170 312 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 TOMM20Q15388 145 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 ZNF283Q8N7M2 679 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 C8orf44Q96CB5 159 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 HIST1H2BLQ99880 126 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 PADI1Q9ULC6 663 aa11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 CHD3Q12873 2000 aaKnown RBP11.79□□□□□ -0.52
PCDHA11-202ENST00000616325 FAM24AA6NFZ4 105 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 A8MVM7 634 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 CST7O76096 145 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 ONECUT2O95948 504 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 IGHV4-34P06331 123 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 NOVA1P51513 510 aaKnown RBP11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 RRADP55042 308 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 EMC4Q5J8M3 183 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 C1orf100Q5SVJ3 147 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 PLPP5Q8NEB5 264 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 OR5T1Q8NG75 326 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 C11orf40Q8WZ69 217 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 MVB12AQ96EY5 273 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 LIN37Q96GY3 246 aaPredicted RBP11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 SLC46A1Q96NT5 459 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 S1PR5Q9H228 398 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 ARHGAP21Q5T5U3 1957 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 PLPP3O14495 311 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 ANOS1P23352 680 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 THBS4P35443 961 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 MFAP5Q13361 173 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 AADACL3Q5VUY0 350 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 WDR25Q64LD2 544 aaPredicted RBP11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 GNG13Q9P2W3 67 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 ESPL1Q14674 2120 aa11.78□□□□□ -0.52
PCDHA11-202ENST00000616325 A6NIZ1 184 aa11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 MASP2O00187 686 aa11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 TMEM225BP0DP42 221 aa11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 FGF7P21781 194 aa11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 POLR2HP52434 150 aaKnown RBP11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 PIGPP57054 158 aa11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 RAP1BP61224 184 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms