RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ZNF75AQ96N20 296 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 CIB3Q96Q77 187 aaPredicted RBP8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 DIRC2Q96SL1 478 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 PLEKHB1Q9UF11 243 aaPredicted RBP8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 PCM1Q15154 2024 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 OR4C45A6NMZ5 311 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 HBE1P02100 147 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 CEACAM3P40198 252 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 NKX6-1P78426 367 aaPredicted RBP8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 PEA15Q15121 130 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 RHOUQ7L0Q8 258 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 OR10AD1Q8NGE0 317 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 OR13C8Q8NGS7 320 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 OR5H6Q8NGV6 325 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 TERB2Q8NHR7 220 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 MALSU1Q96EH3 234 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 AKIRIN1Q9H9L7 192 aaPredicted RBP8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 A0A0B4J2A0 478 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 AKR7A2O43488 359 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 PGA4P0DJD7 388 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 PGA3P0DJD8 388 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 DCTDP32321 178 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 CLINT1Q14677 625 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 OPCMLQ14982 345 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 GABRA6Q16445 453 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 ZNF674Q2M3X9 581 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 ASCL5Q7RTU5 278 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 SHPKQ9UHJ6 478 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 LIPGQ9Y5X9 500 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 GCM2O75603 506 aaPredicted RBP8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 NXPH3O95157 252 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 TGM6O95932 706 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 GLI4P10075 376 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 CALCRP30988 508 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 SRP14P37108 136 aaKnown RBP8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 TLE4Q04727 773 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 ZNF770Q6IQ21 691 aaPredicted RBP8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 C17orf82Q86X59 251 aaPredicted RBP8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 TMEM217Q8N7C4 229 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 OR4C16Q8NGL9 310 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 UHRF2Q96PU4 802 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 GNB4Q9HAV0 340 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 GP6Q9HCN6 339 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 CHCHD2Q9Y6H1 151 aaPredicted RBP8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 LOC102723996A0A087X1L8 192 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 M0R1X1 148 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 SNAPINO95295 136 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 PDCD1Q15116 288 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 PLA1AQ53H76 456 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 SUMF2Q8NBJ7 301 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 OR10V1Q8NGI7 309 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 FLVCR1-AS1Q8TAF5 88 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 CORO2AQ92828 525 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 OR5V1Q9UGF6 321 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 CACNA1EQ15878 2313 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 CHATP28329 748 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 FOXO1Q12778 655 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 OR8G2PQ6IF36 304 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 SLC25A47Q6Q0C1 308 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 CCDC71Q8IV32 467 aaPredicted RBP8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 HPSE2Q8WWQ2 592 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 FAM131CQ96AQ9 280 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 SRRQ9GZT4 340 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 ZNF703Q9H7S9 590 aaPredicted RBP8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 MRPS18AQ9NVS2 196 aaKnown RBP8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 FOXD3Q9UJU5 478 aaPredicted RBP8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 PIKFYVEQ9Y2I7 2098 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 CRYBA1P05813 215 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 UMODP07911 640 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 PSG4Q00888 419 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 OR8U1Q8NH10 309 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 POC1BQ8TC44 478 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 FRZBQ92765 325 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 FAAP24Q9BTP7 215 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 SUCNR1Q9BXA5 334 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 AQP7O14520 342 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 CDIPTO14735 213 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 GPR37O15354 613 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 CTAG2O75638 210 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 GIPP09681 153 aaPredicted RBP8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 TRAPPC2P0DI81 140 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 TRAPPC2BP0DI82 140 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 CEACAM6P40199 344 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 PRSS12P56730 875 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 GUCA2AQ02747 115 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 ABHD17AQ96GS6 310 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 SIGLEC12Q96PQ1 595 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 TIMP4Q99727 224 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 CHST5Q9GZS9 411 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 SLC39A9Q9NUM3 307 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 KLK11Q9UBX7 282 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 PRSS50Q9UI38 385 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 VWA8A3KMH1 1905 aa8.28□□□□□ -1.08
CLTCL1-208ENST00000615606 GMDSO60547 372 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 SEMG1P04279 462 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 CBR1P16152 277 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 PI3P19957 117 aa8.27□□□□□ -1.09
CLTCL1-208ENST00000615606 TNFSF10P50591 281 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms