RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ACACBO00763 2458 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ANTXRLA6NF34 631 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 DCAF7P61962 342 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 OR1Q1Q15612 314 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF880Q6PDB4 577 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 OR8G5Q8NG78 346 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 SHISA4Q96DD7 197 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 OR2A5Q96R48 311 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 LAT2Q9GZY6 243 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 PADI3Q9ULW8 664 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 GAGE12BA1L429 117 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ACRV1P26436 265 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 AADACL3Q5VUY0 350 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 C17orf78Q8N4C9 275 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 HS3ST3A1Q9Y663 406 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CDC14BO60729 498 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 MAS1LP35410 378 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 LBX1P52954 281 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 PDGFRLQ15198 375 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 RNF133Q8WVZ7 376 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 NUDT22Q9BRQ3 303 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 PIPOXQ9P0Z9 390 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 A0A1B0GW64 132 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 LDB2O43679 373 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CST5P28325 142 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 FAAP20Q6NZ36 180 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 GDF7Q7Z4P5 450 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 NEIL2Q969S2 332 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 MED20Q9H944 212 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 ST20Q9HBF5 79 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 GJD2Q9UKL4 321 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CACNA1EQ15878 2313 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CA2P00918 260 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CDKN1CP49918 316 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-213ENST00000613099 JAG1P78504 1218 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CLDN19Q8N6F1 224 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CUTCQ9NTM9 273 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 FTSJ1Q9UET6 329 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 NDUFS4O43181 175 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 SEC13P55735 322 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CXCL9Q07325 125 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 KRTCAP3Q53RY4 240 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 EMC4Q5J8M3 183 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 TCTN3Q6NUS6 607 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 OR1L6Q8NGR2 347 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 WNT2BQ93097 391 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 DERL3Q96Q80 235 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 C20orf144Q9BQM9 153 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 DMRT3Q9NQL9 472 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 GPR84Q9NQS5 396 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 COX11Q9Y6N1 276 aa4.45□□□□□ -1.7
VPS13D-213ENST00000613099 CD74P04233 296 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 TMEM99Q8N816 258 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 GPR32P1Q8NGA4 272 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 IL36AQ9UHA7 158 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CORTO00230 105 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 KLK8O60259 260 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 EIF4E2O60573 245 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CD5P06127 495 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 VSIG10L2P0DP72 767 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF689Q96CS4 500 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 MS4A8Q9BY19 250 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 A0A087WUJ7 227 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 IGKV6D-41A0A0C4DH26 115 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 C1orf226A1L170 272 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 A6NJY4 79 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 M0R296 226 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 HSD17B6O14756 317 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 BLVRBP30043 206 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SEMG2Q02383 582 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 POM121L1PQ3SYA9 428 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 C16orf70Q9BSU1 422 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 MRPS18AQ9NVS2 196 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 APOBEC3BQ9UH17 382 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 HSF4Q9ULV5 492 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 FZD1Q9UP38 647 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SPTAN1Q13813 2472 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 NPSP0C0P6 89 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 OR5AL1P0C617 328 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 LINC00869P0C866 280 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SNU13P55769 128 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 PAX2Q02962 417 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 ACVR1Q04771 509 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 RSPO3Q9BXY4 272 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 PLXNA2O75051 1894 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 C19orf67A6NJJ6 358 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 ANKRD34CP0C6C1 535 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 HIST1H1TP22492 207 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 ASCL1P50553 236 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 GAGE2BQ13066 116 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CLEC12BQ2HXU8 276 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 GAGE2EQ4V326 116 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 COX20Q5RI15 118 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 FAM182BQ5T319 152 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 ARHGEF39Q8N4T4 335 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 MRAP2Q96G30 205 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 FAM173AQ9BQD7 235 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 GAGE2DQ9UEU5 116 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 GRM6O15303 877 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms