RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 DHHO43323 396 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 OR7C1O76099 320 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 JMJD7P0C870 316 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 CCL2P13500 99 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 CAMLGP49069 296 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 ACTBL2Q562R1 376 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 SPIN3Q5JUX0 258 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 ZNF468Q5VIY5 522 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 SEC11CQ9BY50 192 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 hCG_1809904A0A1W2PP81 198 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 A0A1W2PR64 198 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 A0A1W2PRV1 198 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 AQP7P3A6NL99 342 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 A6NLC8 198 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 ATXN7O15265 892 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 PHF1O43189 567 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 SUMO3P55854 103 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 GRB2P62993 217 aaKnown RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 HGFACQ04756 655 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 ZNF528Q3MIS6 628 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 OR9K2Q8NGE7 335 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 GLYATL2Q8WU03 294 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 SLC25A43Q8WUT9 341 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 CHRDQ9H2X0 955 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 IGHV5-10-1A0A0J9YXX1 117 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 MSTNO14793 375 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 MBPP02686 304 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 MPZP25189 248 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 CBX5P45973 191 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 PNLIPRP3Q17RR3 467 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 EIF5AL1Q6IS14 154 aaKnown RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 RPUSD3Q6P087 351 aaKnown RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 USB1Q9BQ65 265 aaKnown RBP12.26□□□□□ -0.45
COL6A1-207ENST00000612273 NELFAQ9H3P2 528 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 ZNF442Q9H7R0 627 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 BIN3Q9NQY0 253 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 ANXA10Q9UJ72 324 aa12.26□□□□□ -0.45
COL6A1-207ENST00000612273 GPR37O15354 613 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 ONECUT2O95948 504 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 CFIP05156 583 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 ZNF728P0DKX0 622 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 CCL4P13236 92 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 SLC35A1P78382 337 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 NAAAQ02083 359 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 HNF4GQ14541 408 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 TMEM217Q8N7C4 229 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 BORCS8Q96FH0 119 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 CHRNA10Q9GZZ6 450 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 RGCCQ9H4X1 137 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 CHCHD2Q9Y6H1 151 aaPredicted RBP12.25□□□□□ -0.45
COL6A1-207ENST00000612273 IGKV1-27A0A075B6S5 117 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 A0A0J9YW62 118 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 GSK3AP49840 483 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 DHRS7BQ6IAN0 325 aaPredicted RBP12.25□□□□□ -0.45
COL6A1-207ENST00000612273 TMEM182Q6ZP80 229 aaPredicted RBP12.25□□□□□ -0.45
COL6A1-207ENST00000612273 FAM24BQ8N5W8 94 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 FAM213BQ8TBF2 198 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 SFT2D1Q8WV19 159 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 HAS2Q92819 552 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 OR51B6Q9H340 312 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 KCNIP3Q9Y2W7 256 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 PUS1Q9Y606 427 aaKnown RBP eCLIP12.25□□□□□ -0.45
COL6A1-207ENST00000612273 SVILO95425 2214 aa12.25□□□□□ -0.45
COL6A1-207ENST00000612273 A0A1W2PPE3 182 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 HTR5AP47898 357 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 RPS18P62269 152 aaKnown RBP12.24□□□□□ -0.45
COL6A1-207ENST00000612273 FBXW12Q6X9E4 464 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 NEK7Q8TDX7 302 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 LOC400499M0QZD8 3231 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 CCDC187A0A096LP49 1063 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 IGHV3-64DA0A0J9YX35 117 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 A0A1W2PPH5 198 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 FIGNL2A6NMB9 653 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 CDRT15L2A8MXV6 281 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 TP53I11O14683 189 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 TXNL1O43396 289 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 SGCEO43556 437 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 ZNF44P15621 663 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 MSX1P28360 303 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 NTF4P34130 210 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 RABEPKQ7Z6M1 372 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 CHST5Q9GZS9 411 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 WFDC1Q9HC57 220 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 CARHSP1Q9Y2V2 147 aaKnown RBP12.24□□□□□ -0.45
COL6A1-207ENST00000612273 SERPINE3A8MV23 424 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 EIF3GO75821 320 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL6A1-207ENST00000612273 CST4P01036 141 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 SRYQ05066 204 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 AWAT1Q58HT5 328 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 WDR74Q6RFH5 385 aaPredicted RBP12.24□□□□□ -0.45
COL6A1-207ENST00000612273 IL34Q6ZMJ4 242 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 ABHD14AQ9BUJ0 271 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 SRXN1Q9BYN0 137 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 ST3GAL6Q9Y274 331 aa12.24□□□□□ -0.45
COL6A1-207ENST00000612273 DSPP15924 2871 aaKnown RBP12.23□□□□□ -0.45
COL6A1-207ENST00000612273 A0A0G2JMM0 328 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 A0A1W2PPB8 328 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 A0A1W2PRS3 328 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 KIR3DP1A8MWS1 328 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 ZNF32P17041 273 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms