RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PRSS57Q6UWY2 283 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 ZNF101Q8IZC7 436 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 OR51A2Q8NGJ7 313 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 OR1J1Q8NGS3 322 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 ZFAND1Q8TCF1 268 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 ITFG2Q969R8 447 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 PTX4Q96A99 478 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 MRPL37Q9BZE1 423 aaKnown RBP7.55□□□□□ -1.2
SMAD4-217ENST00000611848 C20orf85Q9H1P6 137 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 OR51B6Q9H340 312 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 PNRC2Q9NPJ4 139 aaKnown RBP7.55□□□□□ -1.2
SMAD4-217ENST00000611848 MRPL15Q9P015 296 aaKnown RBP7.55□□□□□ -1.2
SMAD4-217ENST00000611848 IGLV3-9A0A075B6K5 115 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 A0A0A6YYH2 397 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 A6NJ64 397 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 SULT1C2O00338 296 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 LMX1BO60663 402 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 PEX14O75381 377 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 RBBP9O75884 186 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 ALDOBP05062 364 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 DBHP09172 617 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 SULT1A3P0DMM9 295 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 SULT1A4P0DMN0 295 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 HSD11B1P28845 292 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 GCH1P30793 250 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 PPOXP50336 477 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 PPP1CBP62140 327 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 MSMPQ1L6U9 139 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 KRTAP27-1Q3LI81 207 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 MBNL2Q5VZF2 373 aaKnown RBP7.54□□□□□ -1.2
SMAD4-217ENST00000611848 SFRP4Q6FHJ7 346 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-217ENST00000611848 OR11H7Q8NGC8 314 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 OR5L1Q8NGL2 311 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 GIMAP1Q8WWP7 306 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 PERPQ96FX8 193 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 MARS2Q96GW9 593 aaKnown RBP7.54□□□□□ -1.2
SMAD4-217ENST00000611848 BARX1Q9HBU1 254 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-217ENST00000611848 TAS2R8Q9NYW2 309 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 DUSP13Q9UII6 198 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 GPR160Q9UJ42 338 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 MED13LQ71F56 2210 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 F8P00451 2351 aa7.54□□□□□ -1.2
SMAD4-217ENST00000611848 VPS13CQ709C8 3753 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 TRAV18A0A075B6X5 111 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 F5H5K5 113 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 M0R135 149 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 SYT7O43581 403 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 KDM4BO94953 1096 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 NGFP01138 241 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 CSF1P09603 554 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 RAB6AP20340 208 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 CCL1P22362 96 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 BDKRB2P30411 391 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 OTX1P32242 354 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-217ENST00000611848 KLF3P57682 345 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-217ENST00000611848 ERVS71-1P61550 626 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 GRB2P62993 217 aaKnown RBP7.53□□□□□ -1.2
SMAD4-217ENST00000611848 TAF13Q15543 124 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 NDUFA5Q16718 116 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 RSPO1Q2MKA7 263 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-217ENST00000611848 Q5BKY6 102 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 C4orf48Q5BLP8 95 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 SPNS3Q6ZMD2 512 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 RFPL4BQ6ZWI9 263 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 LRP11Q86VZ4 500 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 ASCC1Q8N9N2 400 aaKnown RBP7.53□□□□□ -1.2
SMAD4-217ENST00000611848 SLC25A40Q8TBP6 338 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 GPX8Q8TED1 209 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 SPTSSAQ969W0 71 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 APOBEC3DQ96AK3 386 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-217ENST00000611848 FGGYQ96C11 551 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 ZNF799Q96GE5 643 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 MED30Q96HR3 178 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 SORCS2Q96PQ0 1159 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 SYT3Q9BQG1 590 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 TMEM246Q9BRR3 403 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 C1QTNF5Q9BXJ0 243 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 OR2J1Q9GZK6 312 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 RAB1BQ9H0U4 201 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 MS4A5Q9H3V2 200 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 SLA2Q9H6Q3 261 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 DYNLRB1Q9NP97 96 aa7.53□□□□□ -1.2
SMAD4-217ENST00000611848 CGGBP1Q9UFW8 167 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-217ENST00000611848 ACANP16112 2415 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 MEIKINA0A087WXM9 373 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 A0A1B0GVI7 797 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 M0R233 179 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 NDUFB6O95139 128 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 IGHV3-13P01766 116 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 IGHV4-39P01824 125 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 APOC1P02654 83 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 IL5P05113 134 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 ERCC1P07992 297 aaPredicted RBP7.52□□□□□ -1.2
SMAD4-217ENST00000611848 GSTT2P0CG29 244 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 PRSS3P35030 304 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 RCVRNP35243 200 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 FAUP35544 74 aaKnown RBP7.52□□□□□ -1.2
SMAD4-217ENST00000611848 Q5PR19 223 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 LAMTOR1Q6IAA8 161 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 DRAM2Q6UX65 266 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms