RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 HAGHQ16775 308 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 BTNL8Q6UX41 500 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 PNRC2Q9NPJ4 139 aaKnown RBP17.84■□□□□ 0.45
SSBP3-216ENST00000610401 FAM86C1Q9NVL1 165 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 AK3Q9UIJ7 227 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 KNTC1P50748 2209 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 TMEM131Q92545 1883 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 SLC22A25Q6T423 547 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 MYPOPQ86VE0 399 aaPredicted RBP17.84■□□□□ 0.45
SSBP3-216ENST00000610401 MIOXQ9UGB7 285 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 ACKR3P25106 362 aa17.83■□□□□ 0.45
SSBP3-216ENST00000610401 FBXW12Q6X9E4 464 aa17.83■□□□□ 0.45
SSBP3-216ENST00000610401 SLC25A45Q8N413 288 aa17.83■□□□□ 0.45
SSBP3-216ENST00000610401 ZNF565Q8N9K5 539 aa17.83■□□□□ 0.45
SSBP3-216ENST00000610401 LCATP04180 440 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 CD37P11049 281 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 RPS10P46783 165 aaKnown RBP17.83■□□□□ 0.44
SSBP3-216ENST00000610401 CSNK1A1P48729 337 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 LHFPL1Q86WI0 220 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 DEFB126Q9BYW3 111 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 MSTNO14793 375 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 SCRG1O75711 98 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 SCGNO76038 276 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 CST7O76096 145 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 CD27P26842 260 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 ZP4Q12836 540 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 PNLIPRP3Q17RR3 467 aa17.83■□□□□ 0.44
SSBP3-216ENST00000610401 C8orf33Q9H7E9 229 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-216ENST00000610401 FAM24AA6NFZ4 105 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 M0R135 149 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 DEDDO75618 318 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 GSK3AP49840 483 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 CCL20P78556 96 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 C10orf91Q5T1B1 145 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 RPUSD3Q6P087 351 aaKnown RBP17.82■□□□□ 0.44
SSBP3-216ENST00000610401 ZNF799Q96GE5 643 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 BCL2L14Q9BZR8 327 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 GSN-AS1Q9NRJ2 163 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 P4HTMQ9NXG6 502 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 CD5P06127 495 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 DUSP1P28562 367 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 ZNF343Q6P1L6 599 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 KCNJ16Q9NPI9 418 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 MYOTQ9UBF9 498 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 R4GN57 208 aa17.82■□□□□ 0.44
SSBP3-216ENST00000610401 H3BP45 60 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 PIAS2O75928 621 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 JTBO76095 146 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 ZNF728P0DKX0 622 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 ALKBH3Q96Q83 286 aaPredicted RBP17.81■□□□□ 0.44
SSBP3-216ENST00000610401 ACTBL2Q562R1 376 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 ZNF529Q6P280 563 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 SAT2Q96F10 170 aaPredicted RBP17.81■□□□□ 0.44
SSBP3-216ENST00000610401 FAM212BQ9NTI7 297 aaPredicted RBP17.81■□□□□ 0.44
SSBP3-216ENST00000610401 CPAMD8Q8IZJ3 1885 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 CACNA1DQ01668 2161 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 A0A1W2PR77 199 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 NPIPA2E9PIF3 369 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 NPIPA3F8WFD2 350 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 MPZP25189 248 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 ECH1Q13011 328 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 C9orf152Q5JTZ5 239 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 CRIP3Q6Q6R5 217 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 D2HGDHQ8N465 521 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 MVB12AQ96EY5 273 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 ANXA10Q9UJ72 324 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 KCNIP3Q9Y2W7 256 aa17.81■□□□□ 0.44
SSBP3-216ENST00000610401 CCDC187A0A096LP49 1063 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 HGFACQ04756 655 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 TMEM268Q5VZI3 342 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 ZNF774Q6NX45 483 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 FBXL14Q8N1E6 418 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 SLC22A8Q8TCC7 542 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 TCEAL3Q969E4 200 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 ZDBF2Q9HCK1 2354 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 OR7C1O76099 320 aaPredicted RBP17.8■□□□□ 0.44
SSBP3-216ENST00000610401 LY86O95711 162 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 RGS19P49795 217 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 SULT1A1P50225 295 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 EIF5AP63241 154 aaKnown RBP17.8■□□□□ 0.44
SSBP3-216ENST00000610401 SLC25A47Q6Q0C1 308 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 PI4KAP42356 2102 aa17.8■□□□□ 0.44
SSBP3-216ENST00000610401 ARHGAP21Q5T5U3 1957 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 B4GALT1P15291 398 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 PLA2G5P39877 138 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 POLR2GP62487 172 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSBP3-216ENST00000610401 RUNX1Q01196 453 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 WDSUB1Q8N9V3 476 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 ZNF442Q9H7R0 627 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 NCOR1O75376 2440 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 TNFSF11O14788 317 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 ACER2Q5QJU3 275 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 CDPF1Q6NVV7 123 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 PIGCQ92535 297 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 C19orf12Q9NSK7 152 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 WBP1LQ9NX94 342 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 KIAA2026Q5HYC2 2103 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 ATG2AQ2TAZ0 1938 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 RSPO1Q2MKA7 263 aaPredicted RBP17.79■□□□□ 0.44
SSBP3-216ENST00000610401 ZNF468Q5VIY5 522 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms