RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 KIF2BQ8N4N8 673 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 NATD1Q8N6N6 113 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 C12orf29Q8N999 325 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 TMEM35BQ8NCS4 154 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 PXT1Q8NFP0 134 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 OR5B3Q8NH48 314 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 LYPD6BQ8NI32 183 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 CCDC42Q96M95 316 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 OR2A5Q96R48 311 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 DHRS9Q9BPW9 319 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 TMEM109Q9BVC6 243 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC25A2Q9BXI2 301 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 ISYNA1Q9NPH2 558 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 DDX19AQ9NUU7 478 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 CCDC59Q9P031 241 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 VAPAQ9P0L0 249 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 NDRG2Q9UN36 371 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 PSG8Q9UQ74 426 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 SNX24Q9Y343 169 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 NUBP2Q9Y5Y2 271 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 TAF1LQ8IZX4 1826 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 UBN2Q6ZU65 1347 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 SNAPC4Q5SXM2 1469 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 IGHV3-74A0A0B4J1X5 117 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 F5H768 121 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 CCRL2O00421 344 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 KPNA3O00505 521 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 BIRC5O15392 142 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 ERI3O43414 337 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 HPGDSO60760 199 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 NOS1APO75052 506 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 ALOX12BO75342 701 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF324O75467 553 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 TRAPPC6AO75865 159 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 SRP72O76094 671 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 SERPINA1P01009 418 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 SSTR5P35346 364 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 HCAR3P49019 387 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 UBE2KP61086 200 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 AP1S1P61966 158 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 FAM3AP98173 230 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 TFAMQ00059 246 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC25A11Q02978 314 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 MXD1Q05195 221 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 ERCC8Q13216 396 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 KRR1Q13601 381 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 TRMT5Q32P41 509 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 DHRS4L2Q6PKH6 230 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 CD200R1LQ6Q8B3 271 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 DUX4L9Q6RFH8 374 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 CCDC121Q6ZUS5 278 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 SSX6Q7RTT6 188 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 CMTM1Q8IZ96 169 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 OR10G2Q8NGC3 310 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 OR51A7Q8NH64 312 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 OR5K2Q8NHB8 316 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 ITFG1Q8TB96 612 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 DYDC1Q8WWB3 177 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 TMBIM1Q969X1 311 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 TLCD1Q96CP7 247 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 OR5B12Q96R08 314 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 OR2V2Q96R30 315 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 HOPXQ9BPY8 73 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 CHAC1Q9BUX1 264 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 PARP12Q9H0J9 701 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 ACP6Q9NPH0 428 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 RRAGDQ9NQL2 400 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 FBXO8Q9NRD0 319 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 CLN6Q9NWW5 311 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 NDUFAF1Q9Y375 327 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 ARL5AQ9Y689 179 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 CCDC171Q6TFL3 1326 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 NUP155O75694 1391 aa2.61□□□□□ -1.99
SMCHD1-213ENST00000609587 A0A1W2PP18 115 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 TVP23AA6NH52 213 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 M0QZ92 97 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 SULT1C2O00338 296 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 CDIPTO14735 213 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 BET1O15155 118 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 SYNGR1O43759 233 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 SHOX2O60902 331 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 GATBO75879 557 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 ISG15P05161 165 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 CD5P06127 495 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 TFPTP0C1Z6 253 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 LINC00614P0C842 121 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 IGFBP3P17936 291 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 CRABP1P29762 137 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 OMPP47874 163 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 STC1P52823 247 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 TAS2R39P59534 338 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 RAP1AP62834 184 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC35B1P78383 322 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 APOFQ13790 326 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 C16orf72Q14CZ0 275 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 SF3A2Q15428 464 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 TAL2Q16559 108 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 LRRC26Q2I0M4 334 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 SPIN3Q5JUX0 258 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms