RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 TANC2Q9HCD6 1990 aa11.92□□□□□ -0.5
CTSA-211ENST00000606066 CHD3Q12873 2000 aaKnown RBP11.91□□□□□ -0.5
CTSA-211ENST00000606066 IGHV3OR15-7A0A075B7D8 119 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 TRBV5-7A0A0A0MS05 114 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 TRAV20A0A0B4J274 112 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 A8MV72 311 aaPredicted RBP11.91□□□□□ -0.5
CTSA-211ENST00000606066 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.91□□□□□ -0.5
CTSA-211ENST00000606066 TMPRSS2O15393 492 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 ADAM20O43506 726 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 GPX5O75715 221 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 NXPH2O95156 264 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 TNFAIP8O95379 198 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 PLATP00750 562 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 BDKRB2P30411 391 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 TGFBR2P37173 567 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 POU3F4P49335 361 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 DVL1P1P54792 670 aaPredicted RBP11.91□□□□□ -0.5
CTSA-211ENST00000606066 GNB2P62879 340 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
CTSA-211ENST00000606066 PDZK1IP1Q13113 114 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 KISS1Q15726 138 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 ACSM3Q53FZ2 586 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 TMEM186Q96B77 213 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 CEP19Q96LK0 163 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 DERL3Q96Q80 235 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 GPER1Q99527 375 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
CTSA-211ENST00000606066 WDR13Q9H1Z4 485 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 LPAR2Q9HBW0 351 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 KAAG1Q9UBP8 84 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 CLN8Q9UBY8 286 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 FOXJ3Q9UPW0 622 aa11.91□□□□□ -0.5
CTSA-211ENST00000606066 A0A1W2PPK0 400 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 NKX6-3A6NJ46 265 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 OR2AT4A6NND4 320 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 TRAPPC2LH3BP13 241 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 TNFRSF13BO14836 293 aaPredicted RBP11.9□□□□□ -0.5
CTSA-211ENST00000606066 IGFBP3P17936 291 aaPredicted RBP11.9□□□□□ -0.5
CTSA-211ENST00000606066 FSTP19883 344 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 PITPNBP48739 271 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 ARMCX4Q5H9R4 360 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 ATPAF1Q5TC12 328 aaPredicted RBP11.9□□□□□ -0.5
CTSA-211ENST00000606066 UBE2UQ5VVX9 321 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 STUMQ69YW2 141 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 ASPHD2Q6ICH7 369 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 FIP1L1Q6UN15 594 aaKnown RBP11.9□□□□□ -0.5
CTSA-211ENST00000606066 LYPD2Q6UXB3 125 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 UNQ9370/PRO34162Q6UXP9 181 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 ACP7Q6ZNF0 438 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 SATL1Q86VE3 508 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 PHC2Q8IXK0 858 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 SAXO1Q8IYX7 474 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 ZSCAN4Q8NAM6 433 aaPredicted RBP11.9□□□□□ -0.5
CTSA-211ENST00000606066 PHYHIPQ92561 330 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 SLAMF9Q96A28 289 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 MED30Q96HR3 178 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 ZNF488Q96MN9 340 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 SPACA5Q96QH8 159 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 RHOFQ9HBH0 211 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 NOX4Q9NPH5 578 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 SNTG1Q9NSN8 517 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 HIF1ANQ9NWT6 349 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 MTCH1Q9NZJ7 389 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 OR5V1Q9UGF6 321 aa11.9□□□□□ -0.5
CTSA-211ENST00000606066 PPIAL4CA0A0B4J2A2 164 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 A8MXK9 166 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 TMEM225BP0DP42 221 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 GATA3P23771 443 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 GABRA5P31644 462 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 ZNF93P35789 620 aaPredicted RBP11.89□□□□□ -0.51
CTSA-211ENST00000606066 GABRA2P47869 451 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 ERVK11-1P61568 191 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 LCN2P80188 198 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 C11orf91Q3C1V1 193 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 DDI2Q5TDH0 399 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 CD276Q5ZPR3 534 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 CEACAM19Q7Z692 300 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 PNLDC1Q8NA58 520 aaKnown RBP11.89□□□□□ -0.51
CTSA-211ENST00000606066 OR5T2Q8NGG2 359 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 OR52N4Q8NGI2 321 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 OR51A2Q8NGJ7 313 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 ANGPTL6Q8NI99 470 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 TMEM203Q969S6 136 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 RFT1Q96AA3 541 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 SEH1LQ96EE3 360 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 CCL13Q99616 98 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 HES4Q9HCC6 221 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 SMURF1Q9HCE7 757 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 TCF7L1Q9HCS4 588 aa11.89□□□□□ -0.51
CTSA-211ENST00000606066 POLR3KQ9Y2Y1 108 aaPredicted RBP11.89□□□□□ -0.51
CTSA-211ENST00000606066 A0A087WXM4 84 aa11.88□□□□□ -0.51
CTSA-211ENST00000606066 A0A0G2JMP0 313 aa11.88□□□□□ -0.51
CTSA-211ENST00000606066 A0A0X1KG70 313 aa11.88□□□□□ -0.51
CTSA-211ENST00000606066 MEGF11A6BM72 1044 aa11.88□□□□□ -0.51
CTSA-211ENST00000606066 CCRL2O00421 344 aa11.88□□□□□ -0.51
CTSA-211ENST00000606066 GPR37O15354 613 aa11.88□□□□□ -0.51
CTSA-211ENST00000606066 PHF1O43189 567 aaPredicted RBP11.88□□□□□ -0.51
CTSA-211ENST00000606066 SPRY1O43609 319 aaPredicted RBP11.88□□□□□ -0.51
CTSA-211ENST00000606066 NDUFB3O43676 98 aa11.88□□□□□ -0.51
CTSA-211ENST00000606066 ARL6IP5O75915 188 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms