RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PKIBQ9C010 78 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 SIRPDQ9H106 197 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 FGF20Q9NP95 211 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-208ENST00000604743 NKX1-2Q9UD57 310 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-208ENST00000604743 ZNF222Q9UK12 451 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 MAB21L2Q9Y586 359 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 MDFIC2A0A1B0GVS7 189 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 A0A1W2PQ09 198 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 CASQ2O14958 399 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-208ENST00000604743 GPR37O15354 613 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 NOS1APO75052 506 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-208ENST00000604743 GNAO1P09471 354 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 MMP9P14780 707 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 ATF1P18846 271 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 MPZP25189 248 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 AZGP1P25311 298 aaKnown RBP11.89□□□□□ -0.51
TUBE1-208ENST00000604743 PRDX2P32119 198 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 POU3F4P49335 361 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 ETV1P50549 477 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 GTF2A1P52655 376 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-208ENST00000604743 ATP1B3P54709 279 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 ACTG1P63261 375 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 PRB3Q04118 309 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-208ENST00000604743 IL24Q13007 206 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 BAMBIQ13145 260 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 C11orf91Q3C1V1 193 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 OR2G6Q5TZ20 316 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 SLC25A26Q70HW3 274 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 VMO1Q7Z5L0 202 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 CD177Q8N6Q3 437 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 LY6G5BQ8NDX9 201 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 OR5AK2Q8NH90 309 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 RFT1Q96AA3 541 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 PDCD1LG2Q9BQ51 273 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 NRIP2Q9BQI9 281 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 COMMD4Q9H0A8 199 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 VCXQ9H320 206 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 DCLRE1BQ9H816 532 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 MTCH1Q9NZJ7 389 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 STAB1Q9NY15 2570 aa11.89□□□□□ -0.51
TUBE1-208ENST00000604743 IGKV1-9A0A0C4DH69 117 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 TRBV2A0A0J9YWF9 115 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 CENPVL3A0A0U1RRI6 287 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 IRGMA1A4Y4 181 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 F8VVB4 439 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 F8VWA3 439 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 SLC1A7O00341 560 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 ZFPL1O95159 310 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 CCDC159P0C7I6 412 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 DCKP27707 260 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 RBP2P50120 134 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 MTCP1P56278 107 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 MRPL28Q13084 256 aaKnown RBP11.88□□□□□ -0.51
TUBE1-208ENST00000604743 IL18R1Q13478 541 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 PDCD1Q15116 288 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 C8orf59Q8N0T1 100 aaPredicted RBP11.88□□□□□ -0.51
TUBE1-208ENST00000604743 FAM185AQ8N0U4 392 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 OR13C9Q8NGT0 318 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 TSEN15Q8WW01 171 aaKnown RBP11.88□□□□□ -0.51
TUBE1-208ENST00000604743 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 SDSLQ96GA7 329 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 CEP19Q96LK0 163 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 SPACA5Q96QH8 159 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 SIRT7Q9NRC8 400 aa11.88□□□□□ -0.51
TUBE1-208ENST00000604743 DNAJC9-AS1A6NH13 148 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 TMEM212A6NML5 194 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 SPRY1O43609 319 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-208ENST00000604743 CALCBP10092 127 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 MYL12AP19105 171 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 PRKACBP22694 351 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 SNU13P55769 128 aaKnown RBP11.87□□□□□ -0.51
TUBE1-208ENST00000604743 DLX1P56177 255 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 CAV3P56539 151 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 ERVK11-1P61568 191 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 UBA52P62987 128 aaKnown RBP11.87□□□□□ -0.51
TUBE1-208ENST00000604743 SLC34A1Q06495 639 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 XAF1Q6GPH4 301 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 TMPRSS11AQ6ZMR5 421 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 C9orf139Q6ZV77 190 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 UTS2BQ765I0 119 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 EGFL6Q8IUX8 553 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 CMTM4Q8IZR5 234 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 ZNF561Q8N587 486 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 ZFAND2BQ8WV99 257 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 GATAD2BQ8WXI9 593 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 GGHQ92820 318 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 TMEM80Q96HE8 168 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 OPALINQ96PE5 141 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 HES4Q9HCC6 221 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 TNFRSF19Q9NS68 423 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 CHCHD3Q9NX63 227 aaKnown RBP11.87□□□□□ -0.51
TUBE1-208ENST00000604743 CLEC2DQ9UHP7 191 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 DIMT1Q9UNQ2 313 aaKnown RBP11.87□□□□□ -0.51
TUBE1-208ENST00000604743 DHDHQ9UQ10 334 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 CAB39Q9Y376 341 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-208ENST00000604743 EXOSC1Q9Y3B2 195 aaKnown RBP11.87□□□□□ -0.51
TUBE1-208ENST00000604743 KPTNQ9Y664 436 aa11.87□□□□□ -0.51
TUBE1-208ENST00000604743 A0A1W2PRD5 423 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms