RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	KAAG1	Q9UBP8	84 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	ABCA1	O95477	2261 aa		10.86	□□□□□ -0.67
SRRM1-223	ENST00000600523	IGKV1-9	A0A0C4DH69	117 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	ZNF879	B4DU55	563 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	ENSA	O43768	121 aa	Known RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	LIPF	P07098	398 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	TMEM225B	P0DP42	221 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	BDKRB2	P30411	391 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	RBMX	P38159	391 aa	Known RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	BMX	P51813	675 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	CAPZA1	P52907	286 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	MLLT11	Q13015	90 aa	Predicted RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	PDZK1IP1	Q13113	114 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	IRF3	Q14653	427 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	KISS1	Q15726	138 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	TBCE	Q15813	527 aa	Predicted RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	WDR25	Q64LD2	544 aa	Predicted RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	STUM	Q69YW2	141 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	LYPD2	Q6UXB3	125 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	ACP7	Q6ZNF0	438 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	ZNF367	Q7RTV3	350 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	SAXO1	Q8IYX7	474 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	OR5T2	Q8NGG2	359 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	ST8SIA4	Q92187	359 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	RGP1	Q92546	391 aa	Predicted RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	EMG1	Q92979	244 aa	Known RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	SLAMF9	Q96A28	289 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	PGLYRP3	Q96LB9	341 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	OR14A2	Q96R54	314 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	OR5M11	Q96RB7	305 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	TMED9	Q9BVK6	235 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	C7orf69	Q9H7B7	122 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	SMURF1	Q9HCE7	757 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	PCDHB16	Q9NRJ7	776 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	TAS2R4	Q9NYW5	299 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	CSPG4	Q6UVK1	2322 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	VPS13C	Q709C8	3753 aa		10.85	□□□□□ -0.67
SRRM1-223	ENST00000600523	TRBV5-5	A0A0J9YX44	114 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	DVL1	O14640	695 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	CRLF1	O75462	422 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	KNG1	P01042	644 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	IFNA2	P01563	188 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	ALDOB	P05062	364 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	SRD5A1	P18405	259 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	TGFBR2	P37173	567 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	SEC61A1	P61619	476 aa	Known RBP	10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	IKZF1	Q13422	519 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	DDI2	Q5TDH0	399 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	LIPK	Q5VXJ0	399 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	ZNF561	Q8N587	486 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	TMEM185A	Q8NFB2	350 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	ANGPTL6	Q8NI99	470 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	RAB40A	Q8WXH6	277 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	SGCD	Q92629	289 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	FCGR1B	Q92637	280 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	RFT1	Q96AA3	541 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	MGLL	Q99685	303 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	NUDT16L1	Q9BRJ7	211 aa	Known RBP	10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	FAM192A	Q9GZU8	254 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	SLITRK2	Q9H156	845 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	ELL3	Q9HB65	397 aa	Predicted RBP	10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	TCF7L1	Q9HCS4	588 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	OR14J1	Q9UGF5	321 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	FOXJ3	Q9UPW0	622 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	LSM2	Q9Y333	95 aa	Known RBP	10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	LRRC42	Q9Y546	428 aa		10.84	□□□□□ -0.67
SRRM1-223	ENST00000600523	IGKV1-27	A0A075B6S5	117 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523		A0A1W2PPH5	198 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	MEGF11	A6BM72	1044 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	RFPL4A	A6NLU0	287 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	RFPL4AL1	F8VTS6	287 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	INMT	O95050	263 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	PSG2	P11465	335 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	NDUFB7	P17568	137 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	FST	P19883	344 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	ZFP36	P26651	326 aa	Known RBP	10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	PRDX2	P32119	198 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	ZNF93	P35789	620 aa	Predicted RBP	10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	HOXA4	Q00056	320 aa	Predicted RBP	10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	DOC2B	Q14184	412 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	RSU1	Q15404	277 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	ACSM3	Q53FZ2	586 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	SPIN3	Q5JUX0	258 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	ZNF788	Q6ZQV5	615 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	CMTM4	Q8IZR5	234 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	FAM58A	Q8N1B3	248 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	FAM216B	Q8N7L0	139 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	NKAIN3	Q8N8D7	197 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	OR5D18	Q8NGL1	313 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	OR13C5	Q8NGS8	318 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	PPP1R35	Q8TAP8	253 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	NANP	Q8TBE9	248 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	TNFAIP8L1	Q8WVP5	186 aa		10.83	□□□□□ -0.68
SRRM1-223	ENST00000600523	H1FX	Q92522	213 aa	Known RBP	10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms