RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 DUX4L9Q6RFH8 374 aaPredicted RBP11.45□□□□□ -0.58
VRK3-219ENST00000600137 CLEC9AQ6UXN8 241 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 ACP7Q6ZNF0 438 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 DCDC5Q6ZRR9 648 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 LHFPL2Q6ZUX7 228 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 C1QL2Q7Z5L3 287 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 LINC01356Q8N9X3 169 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 OR5T2Q8NGG2 359 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 ANGPTL6Q8NI99 470 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 RFT1Q96AA3 541 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 DACT3Q96B18 629 aaPredicted RBP11.45□□□□□ -0.58
VRK3-219ENST00000600137 TMED9Q9BVK6 235 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 NOX4Q9NPH5 578 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 KAAG1Q9UBP8 84 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 DUX4Q9UBX2 424 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 ZNF222Q9UK12 451 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 POLR3KQ9Y2Y1 108 aaPredicted RBP11.45□□□□□ -0.58
VRK3-219ENST00000600137 ZFHX3Q15911 3703 aa11.45□□□□□ -0.58
VRK3-219ENST00000600137 IGKV1D-17A0A075B6S4 117 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 A8MXK9 166 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 SPRY1O43609 319 aaPredicted RBP11.44□□□□□ -0.58
VRK3-219ENST00000600137 PSG2P11465 335 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 ADRA2CP18825 462 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 RAB3AP20336 220 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 GLRA1P23415 457 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 CPT2P23786 658 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 NPBWR2P48146 333 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 GMFBP60983 142 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 ASCL4Q6XD76 172 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 ZNF788Q6ZQV5 615 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 SLC25A26Q70HW3 274 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 Q71RC1 249 aaPredicted RBP11.44□□□□□ -0.58
VRK3-219ENST00000600137 BATF2Q8N1L9 274 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 SVOPQ8N4V2 548 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 UFD1Q92890 307 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 TMEM203Q969S6 136 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 C12orf43Q96C57 262 aaKnown RBP11.44□□□□□ -0.58
VRK3-219ENST00000600137 RAB39BQ96DA2 213 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 CCL13Q99616 98 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 NKX3-1Q99801 234 aaPredicted RBP11.44□□□□□ -0.58
VRK3-219ENST00000600137 SMURF1Q9HCE7 757 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 SNTG1Q9NSN8 517 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 RASL12Q9NYN1 266 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 MIOXQ9UGB7 285 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 FOXJ3Q9UPW0 622 aa11.44□□□□□ -0.58
VRK3-219ENST00000600137 OR2AT4A6NND4 320 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 B4DSR2 109 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 TRAPPC2LH3BP13 241 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 NDUFA2O43678 99 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 ANGPTL7O43827 346 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 TGFAP01135 160 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 UCHL1P09936 223 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 ZNF16P17020 682 aaPredicted RBP11.43□□□□□ -0.58
VRK3-219ENST00000600137 FABP5Q01469 135 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 MICBQ29980 383 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 SYT6Q5T7P8 510 aaPredicted RBP11.43□□□□□ -0.58
VRK3-219ENST00000600137 CD200R1LQ6Q8B3 271 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 FGFRL1Q8N441 504 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 Q8NFD4 153 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 SLAMF9Q96A28 289 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 NEIL1Q96FI4 390 aaPredicted RBP11.43□□□□□ -0.58
VRK3-219ENST00000600137 ZNF696Q9H7X3 374 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 TMEM138Q9NPI0 162 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 MMP26Q9NRE1 261 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 NLKQ9UBE8 527 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 PCDHB10Q9UN67 800 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 POLDIP2Q9Y2S7 368 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 MAB21L2Q9Y586 359 aa11.43□□□□□ -0.58
VRK3-219ENST00000600137 GABRPO00591 440 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 PHF1O43189 567 aaPredicted RBP11.42□□□□□ -0.58
VRK3-219ENST00000600137 ADAM20O43506 726 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 KDM4BO94953 1096 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 PLATP00750 562 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 SFTPBP07988 381 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 MSMBP08118 114 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 SELLP14151 372 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 RPS2P15880 293 aaKnown RBP11.42□□□□□ -0.58
VRK3-219ENST00000600137 BDKRB2P30411 391 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 POU3F4P49335 361 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 DVL1P1P54792 670 aaPredicted RBP11.42□□□□□ -0.58
VRK3-219ENST00000600137 WDR25Q64LD2 544 aaPredicted RBP11.42□□□□□ -0.58
VRK3-219ENST00000600137 CEACAM19Q7Z692 300 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 LRRTM1Q86UE6 522 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 MKXQ8IYA7 352 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 SAXO1Q8IYX7 474 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 CD177Q8N6Q3 437 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 ZSCAN4Q8NAM6 433 aaPredicted RBP11.42□□□□□ -0.58
VRK3-219ENST00000600137 OR5D18Q8NGL1 313 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 OR51F2Q8NH61 342 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 TMIGD2Q96BF3 282 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 CEP19Q96LK0 163 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 GAFA1Q96PS6 74 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 DNTTIP1Q9H147 329 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 LPAR2Q9HBW0 351 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 NDUFB11Q9NX14 153 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 IL36RNQ9UBH0 155 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
VRK3-219ENST00000600137 PPIAL4CA0A0B4J2A2 164 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 RFPL4AA6NLU0 287 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 RFPL4AL1F8VTS6 287 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms