RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 TMIGD2Q96BF3 282 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 SMIM19Q96E16 107 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 RASSF4Q9H2L5 321 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 VCX3BQ9H321 246 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 DUX4Q9UBX2 424 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 RPUSD1Q9UJJ7 312 aaKnown RBP14.59□□□□□ -0.07
USHBP1-209ENST00000598570 TRBV5-5A0A0J9YX44 114 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 ATP6V1G2O95670 118 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 PLATP00750 562 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 CDK1P06493 297 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 SRP14P37108 136 aaKnown RBP14.58□□□□□ -0.08
USHBP1-209ENST00000598570 RBP2P50120 134 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 SLC35A2P78381 396 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 SCGB2A2Q13296 93 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 MED21Q13503 144 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 DOC2BQ14184 412 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 IRF3Q14653 427 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 DGUOKQ16854 277 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 SMIM21Q3B7S5 101 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 C1orf122Q6ZSJ8 110 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 SERPINA12Q8IW75 414 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 SAXO1Q8IYX7 474 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 CD177Q8N6Q3 437 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 FAM216BQ8N7L0 139 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 OR5D14Q8NGL3 314 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 GATAD2BQ8WXI9 593 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 PGLYRP3Q96LB9 341 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 MRI1Q9BV20 369 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 COMMD4Q9H0A8 199 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 SIRPDQ9H106 197 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 PRDM13Q9H4Q3 707 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 ZCCHC4Q9H5U6 513 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 RHOFQ9HBH0 211 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 DNAJB11Q9UBS4 358 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 PCDHGB5Q9Y5G0 923 aa14.58□□□□□ -0.08
USHBP1-209ENST00000598570 ZNF879B4DU55 563 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 F8VVB4 439 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 F8VWA3 439 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 KNG1P01042 644 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 AZGP1P25311 298 aaKnown RBP14.57□□□□□ -0.08
USHBP1-209ENST00000598570 HSPA13P48723 471 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 ATP1B3P54709 279 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 BPIFB3P59826 476 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 IL13RA1P78552 427 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 BDH1Q02338 343 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 PDZK1IP1Q13113 114 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 LHFPL2Q6ZUX7 228 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 BTN2A1Q7KYR7 527 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 KIR3DL3Q8N743 410 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 PNLDC1Q8NA58 520 aaKnown RBP14.57□□□□□ -0.08
USHBP1-209ENST00000598570 Q8NFD4 153 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 BPIFB6Q8NFQ5 453 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 OR13C3Q8NGS6 347 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 GPR148Q8TDV2 347 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 ZNF488Q96MN9 340 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 DCTN5Q9BTE1 182 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 NUP50Q9UKX7 468 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 ZNF281Q9Y2X9 895 aa14.57□□□□□ -0.08
USHBP1-209ENST00000598570 FAM230AA0A1W2PPH8 454 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 H3BSH0 61 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 SLC1A7O00341 560 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 NDUFB3O43676 98 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 ALDOBP05062 364 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 ZNF20P17024 532 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 EPHA1P21709 976 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 PRDX2P32119 198 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 ASCL4Q6XD76 172 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 Q8IYB0 196 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 FGFRL1Q8N441 504 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 ZNF561Q8N587 486 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 ZSCAN4Q8NAM6 433 aaPredicted RBP14.56□□□□□ -0.08
USHBP1-209ENST00000598570 GHSRQ92847 366 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 BORCS8Q96FH0 119 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 CEP19Q96LK0 163 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 OPALINQ96PE5 141 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 MDFIQ99750 246 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 FAM234AQ9H0X4 552 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 CNTD2Q9H8S5 307 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 UNKLQ9H9P5 680 aaKnown RBP14.56□□□□□ -0.08
USHBP1-209ENST00000598570 SNTG1Q9NSN8 517 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 PAK1IP1Q9NWT1 392 aaPredicted RBP14.56□□□□□ -0.08
USHBP1-209ENST00000598570 CHCHD3Q9NX63 227 aaKnown RBP14.56□□□□□ -0.08
USHBP1-209ENST00000598570 LSM2Q9Y333 95 aaKnown RBP14.56□□□□□ -0.08
USHBP1-209ENST00000598570 KPTNQ9Y664 436 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 STAB1Q9NY15 2570 aa14.56□□□□□ -0.08
USHBP1-209ENST00000598570 RFPL4AA6NLU0 287 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 RFPL4AL1F8VTS6 287 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 MTCP1P56278 107 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 WNT4P56705 351 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 TAS2R43P59537 309 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 ZP1P60852 638 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 ZNF146Q15072 292 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 LRRC10Q5BKY1 277 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 SLC25A26Q70HW3 274 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 AHSA2Q719I0 299 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 RNF144BQ7Z419 303 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 MKXQ8IYA7 352 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 TRMT10AQ8TBZ6 339 aaKnown RBP14.55□□□□□ -0.08
USHBP1-209ENST00000598570 TBX15Q96SF7 602 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 RAB26Q9ULW5 256 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms