RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 OR4F5Q8NH21 305 aa12.34□□□□□ -0.43
LIG1-215ENST00000597901 TRMT10AQ8TBZ6 339 aaKnown RBP12.34□□□□□ -0.43
LIG1-215ENST00000597901 DYRK2Q92630 601 aa12.34□□□□□ -0.43
LIG1-215ENST00000597901 RNFT2Q96EX2 444 aa12.34□□□□□ -0.43
LIG1-215ENST00000597901 PKIBQ9C010 78 aa12.34□□□□□ -0.43
LIG1-215ENST00000597901 DPAGT1Q9H3H5 408 aa12.34□□□□□ -0.43
LIG1-215ENST00000597901 BEX1Q9HBH7 125 aa12.34□□□□□ -0.43
LIG1-215ENST00000597901 HES4Q9HCC6 221 aa12.34□□□□□ -0.43
LIG1-215ENST00000597901 AASSQ9UDR5 926 aa12.34□□□□□ -0.43
LIG1-215ENST00000597901 DAPL1A0PJW8 107 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 SLC1A7O00341 560 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 NDUFA7O95182 113 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 FBP1P09467 338 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 RAG2P55895 527 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 OR12D2P58182 307 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 IL24Q13007 206 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 NCR3LG1Q68D85 454 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 HCP5Q6MZN7 132 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 FAM220AQ7Z4H9 259 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 OR2G2Q8NGZ5 317 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 SLC29A1Q99808 456 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 PLEKHA1Q9HB21 404 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 C19orf12Q9NSK7 152 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 MTCH1Q9NZJ7 389 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 FRRS1LQ9P0K9 344 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 OR14J1Q9UGF5 321 aa12.33□□□□□ -0.44
LIG1-215ENST00000597901 EXOGQ9Y2C4 368 aaKnown RBP12.33□□□□□ -0.44
LIG1-215ENST00000597901 SF3B6Q9Y3B4 125 aaKnown RBP12.33□□□□□ -0.44
LIG1-215ENST00000597901 IGKV1-27A0A075B6S5 117 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 MEIOCA2RUB1 952 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 F8VVB4 439 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 F8VWA3 439 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 GPR137BO60478 399 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 KNG1P01042 644 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 TK1P04183 234 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 RPL15P61313 204 aaKnown RBP12.32□□□□□ -0.44
LIG1-215ENST00000597901 RPL31P62899 125 aaKnown RBP12.32□□□□□ -0.44
LIG1-215ENST00000597901 ACTC1P68032 377 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 ACTA1P68133 377 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 ACSM1Q08AH1 577 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 TMEM244Q5VVB8 128 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 FDX2Q6P4F2 183 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 C11orf42Q8N5U0 333 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 OR4M1Q8NGD0 313 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 OR5D13Q8NGL4 314 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 C10orf35Q96D05 121 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 MBOAT4Q96T53 435 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 ZNF696Q9H7X3 374 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 S100A14Q9HCY8 104 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 GMPPBQ9Y5P6 360 aa12.32□□□□□ -0.44
LIG1-215ENST00000597901 LOC107986453A0A1B0GWG9 222 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 CLPSL1A2RUU4 121 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 SNTNA6NMZ2 147 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 J3QLW9 94 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 EBAG9O00559 213 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 SLC16A6O15403 523 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 GATBO75879 557 aaKnown RBP12.31□□□□□ -0.44
LIG1-215ENST00000597901 INMTO95050 263 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 ISG15P05161 165 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 CHRM2P08172 466 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 UBCP0CG48 685 aaKnown RBP12.31□□□□□ -0.44
LIG1-215ENST00000597901 ZNF19P17023 458 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 GABRB1P18505 474 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 SAA4P35542 130 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 NANOS3P60323 173 aaKnown RBP12.31□□□□□ -0.44
LIG1-215ENST00000597901 TAF9Q16594 264 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 PRR31Q5SQ13 230 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 OLFML2AQ68BL7 652 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 GDPGP1Q6ZNW5 385 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 ZBTB49Q6ZSB9 765 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 EGFL6Q8IUX8 553 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 MKXQ8IYA7 352 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 ACBD7Q8N6N7 88 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 RHOXF1Q8NHV9 184 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 FGGYQ96C11 551 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 LGALS12Q96DT0 336 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 ADAT3Q96EY9 351 aaPredicted RBP12.31□□□□□ -0.44
LIG1-215ENST00000597901 BORCS8Q96FH0 119 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 CEP19Q96LK0 163 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 C9orf16Q9BUW7 83 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 CHST5Q9GZS9 411 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 FAM234AQ9H0X4 552 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 ZNRD1Q9P1U0 126 aa12.31□□□□□ -0.44
LIG1-215ENST00000597901 IGKV1-9A0A0C4DH69 117 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 A0A1W2PPH5 198 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 K7N7A8 449 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 PAHP00439 452 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 ATF1P18846 271 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 CCR9P51686 369 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 ATP1B3P54709 279 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 ERVFRD-1P60508 538 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 COL10A1Q03692 680 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 SRSF4Q08170 494 aaKnown RBP12.3□□□□□ -0.44
LIG1-215ENST00000597901 SLC25A26Q70HW3 274 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 LHFPL3Q86UP9 236 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 DNAAF1Q8NEP3 725 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 PP6455Q8WZ26 134 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 SLAMF9Q96A28 289 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 HEXA-AS1Q9H8Q6 139 aa12.3□□□□□ -0.44
LIG1-215ENST00000597901 LOC100130705A0A1B0GUX0 176 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms