RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ZNF561Q8N587 486 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 C11orf42Q8N5U0 333 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 OR4F5Q8NH21 305 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 TBC1D15Q8TC07 691 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 C17orf50Q8WW18 174 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 TRUB1Q8WWH5 349 aaKnown RBP10.66□□□□□ -0.7
LIG1-212ENST00000596549 RNFT2Q96EX2 444 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 ADAT3Q96EY9 351 aaPredicted RBP10.66□□□□□ -0.7
LIG1-212ENST00000596549 SLITRK2Q9H156 845 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 ZNF696Q9H7X3 374 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 METTL8Q9H825 291 aaKnown RBP10.66□□□□□ -0.7
LIG1-212ENST00000596549 OR14J1Q9UGF5 321 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.66□□□□□ -0.7
LIG1-212ENST00000596549 IGKV1-9A0A0C4DH69 117 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 KNG1P01042 644 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 TK1P04183 234 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 CCL3L1P16619 93 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 PRDX2P32119 198 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 ATP6V1E1P36543 226 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 UBE2E1P51965 193 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 CAPZA1P52907 286 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 KRTAP10-3P60369 221 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 ERVFRD-1P60508 538 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 RPL15P61313 204 aaKnown RBP10.65□□□□□ -0.7
LIG1-212ENST00000596549 ACTC1P68032 377 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 ACTA1P68133 377 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 ZNF91Q05481 1191 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 OCLNQ16625 522 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 SLC25A30Q5SVS4 291 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 NCR3LG1Q68D85 454 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 C1orf122Q6ZSJ8 110 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 CCDC121Q6ZUS5 278 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 TCF23Q7RTU1 214 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 MKXQ8IYA7 352 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 ENTHD1Q8IYW4 607 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 OR2G2Q8NGZ5 317 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 OR10AC1Q8NH08 325 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 SLAMF9Q96A28 289 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 AJUBAQ96IF1 538 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 MTCH1Q9NZJ7 389 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 FRRS1LQ9P0K9 344 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 IL36RNQ9UBH0 155 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
LIG1-212ENST00000596549 MEIOCA2RUB1 952 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 SLC1A7O00341 560 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 SLC16A6O15403 523 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 ZNF737O75373 536 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 GATBO75879 557 aaKnown RBP10.64□□□□□ -0.71
LIG1-212ENST00000596549 CRYBA1P05813 215 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 DBTP11182 482 aaKnown RBP10.64□□□□□ -0.71
LIG1-212ENST00000596549 EEF1B2P24534 225 aaKnown RBP10.64□□□□□ -0.71
LIG1-212ENST00000596549 PAX6P26367 422 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 OR12D2P58182 307 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 COL10A1Q03692 680 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 ACSM1Q08AH1 577 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 OLFML2AQ68BL7 652 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 TMEM200BQ69YZ2 307 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 FDX2Q6P4F2 183 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 OR4M1Q8NGD0 313 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 OR51A4Q8NGJ6 313 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 LINC01006Q8NI28 216 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 PELI1Q96FA3 418 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 CEP19Q96LK0 163 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 SLC29A1Q99808 456 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 ZNF649Q9BS31 505 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 EXOGQ9Y2C4 368 aaKnown RBP10.64□□□□□ -0.71
LIG1-212ENST00000596549 CAB39Q9Y376 341 aaPredicted RBP10.64□□□□□ -0.71
LIG1-212ENST00000596549 FAM96BQ9Y3D0 163 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 ORC6Q9Y5N6 252 aa10.64□□□□□ -0.71
LIG1-212ENST00000596549 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 CLPSL1A2RUU4 121 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 H0YAE9 185 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 ANGPTL7O43827 346 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 ISG15P05161 165 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 PIPP12273 146 aaPredicted RBP10.63□□□□□ -0.71
LIG1-212ENST00000596549 BMXP51813 675 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 FUT6P51993 359 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 DLX6P56179 175 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 RPL31P62899 125 aaKnown RBP10.63□□□□□ -0.71
LIG1-212ENST00000596549 BLMHQ13867 455 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 CNN3Q15417 329 aaKnown RBP10.63□□□□□ -0.71
LIG1-212ENST00000596549 MEDAGQ5VYS4 303 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 CRIP3Q6Q6R5 217 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 Q6ZSV7 163 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 SLC25A26Q70HW3 274 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 RNF144BQ7Z419 303 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 CCDC54Q8NEL0 328 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 APH1BQ8WW43 257 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 PP6455Q8WZ26 134 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 C10orf35Q96D05 121 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 LGALS12Q96DT0 336 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 BORCS8Q96FH0 119 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 C4orf36Q96KX1 117 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 CITED1Q99966 193 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 FAM234AQ9H0X4 552 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 DPAGT1Q9H3H5 408 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 BEX1Q9HBH7 125 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 S100A14Q9HCY8 104 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 SLC7A11Q9UPY5 501 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 MYRFQ9Y2G1 1151 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms