RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 CLVS2Q5SYC1 327 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 LCN1P1Q5VSP4 162 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 TMEM42Q69YG0 159 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 TMEM219Q86XT9 240 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 Q8N2B8 174 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 NRIP2Q9BQI9 281 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 HES4Q9HCC6 221 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 GTF2A1LQ9UNN4 478 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 POLDIP2Q9Y2S7 368 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 ZNF281Q9Y2X9 895 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 TMEM14AQ9Y6G1 99 aa12.86□□□□□ -0.35
LINC02560-201ENST00000596379 MEX3AA1L020 520 aaKnown RBP12.85□□□□□ -0.35
LINC02560-201ENST00000596379 A6NDX4 124 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 AQP12BA6NM10 295 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 K7N7A8 449 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 DLGAP1O14490 977 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
LINC02560-201ENST00000596379 XPNPEP2O43895 674 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 SRSF10O75494 262 aaKnown RBP12.85□□□□□ -0.35
LINC02560-201ENST00000596379 ALX3O95076 343 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 COL10A1Q03692 680 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 CNN3Q15417 329 aaKnown RBP12.85□□□□□ -0.35
LINC02560-201ENST00000596379 SSX2Q16385 188 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 LDLRAD2Q5SZI1 272 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 ANGPTL5Q86XS5 388 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 AQP12AQ8IXF9 295 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 OR4S1Q8NGB4 309 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 OR14K1Q8NGZ2 314 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 MRAPQ8TCY5 172 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 R3HDM4Q96D70 268 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 MALSU1Q96EH3 234 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 CITED2Q99967 270 aaPredicted RBP12.85□□□□□ -0.35
LINC02560-201ENST00000596379 APOL4Q9BPW4 351 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 CDCA4Q9BXL8 241 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 ABCB10Q9NRK6 738 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 TBL2Q9Y4P3 447 aaKnown RBP12.85□□□□□ -0.35
LINC02560-201ENST00000596379 V9GYS6 101 aa12.85□□□□□ -0.35
LINC02560-201ENST00000596379 A0A1B0GTI1 187 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 ODF3BA8MYP8 253 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 LOC110117498-PIK3R3F6TDL0 507 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 MPZP25189 248 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 CRISP1P54107 249 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 CXCR4P61073 352 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 ERVK11-1P61568 191 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 ZNF322Q6U7Q0 402 aaPredicted RBP12.84□□□□□ -0.35
LINC02560-201ENST00000596379 PLEKHG7Q6ZR37 379 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 NDUFA11Q86Y39 141 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 ELMOD2Q8IZ81 293 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 ASCC1Q8N9N2 400 aaKnown RBP12.84□□□□□ -0.35
LINC02560-201ENST00000596379 OR13D1Q8NGV5 346 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 RPS4Y2Q8TD47 263 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 WIPF2Q8TF74 440 aaPredicted RBP12.84□□□□□ -0.35
LINC02560-201ENST00000596379 SGCDQ92629 289 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 OR5M11Q96RB7 305 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 CNN2Q99439 309 aaKnown RBP12.84□□□□□ -0.35
LINC02560-201ENST00000596379 THTPAQ9BU02 230 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 PRSS22Q9GZN4 317 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 SLC22A13Q9Y226 551 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 R4GMQ9 66 aa12.84□□□□□ -0.35
LINC02560-201ENST00000596379 ADARB2-AS1A8MUL3 147 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 PRKYO43930 277 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 PEX14O75381 377 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 CHRM2P08172 466 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 ZNF728P0DKX0 622 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 EDDM3BP56851 147 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 LOXL3P58215 753 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 BLCAPP62952 87 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 BCL2L15Q5TBC7 163 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 ZNF626Q68DY1 528 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 Q6ZS46 218 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 MEPCEQ7L2J0 689 aaKnown RBP12.83□□□□□ -0.36
LINC02560-201ENST00000596379 BCDIN3DQ7Z5W3 292 aaKnown RBP12.83□□□□□ -0.36
LINC02560-201ENST00000596379 OR4F17Q8NGA8 305 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 OR11H6Q8NGC7 330 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 TRMT10AQ8TBZ6 339 aaKnown RBP12.83□□□□□ -0.36
LINC02560-201ENST00000596379 FOXRED1Q96CU9 486 aaPredicted RBP12.83□□□□□ -0.36
LINC02560-201ENST00000596379 OR4F4Q96R69 305 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 PKIBQ9C010 78 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 MOB1AQ9H8S9 216 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 NECAP2Q9NVZ3 263 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 DNAJB9Q9UBS3 223 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 PITPNC1Q9UKF7 332 aa12.83□□□□□ -0.36
LINC02560-201ENST00000596379 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC02560-201ENST00000596379 F8VVB4 439 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 F8VWA3 439 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 ZNF737O75373 536 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 IGHV1-8P0DP01 117 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 JUNBP17275 347 aaPredicted RBP12.82□□□□□ -0.36
LINC02560-201ENST00000596379 HOXB6P17509 224 aaKnown RBP12.82□□□□□ -0.36
LINC02560-201ENST00000596379 ACTR3P61158 418 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 CBX1P83916 185 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 IL24Q13007 206 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 DYNC1I2Q13409 638 aaKnown RBP12.82□□□□□ -0.36
LINC02560-201ENST00000596379 PTGES3Q15185 160 aaKnown RBP12.82□□□□□ -0.36
LINC02560-201ENST00000596379 GDPD3Q7L5L3 318 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 SLC35F2Q8IXU6 374 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 WNT10AQ9GZT5 417 aa12.82□□□□□ -0.36
LINC02560-201ENST00000596379 PAPOLBQ9NRJ5 636 aaKnown RBP12.82□□□□□ -0.36
LINC02560-201ENST00000596379 SNX5Q9Y5X3 404 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms