RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 ERVK11-1P61568 191 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 FAHD2BQ6P2I3 314 aaPredicted RBP21.45■■□□□ 1.02
TRIM28-204ENST00000594806 Q8IYB0 196 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 SGCDQ92629 289 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 FAHD2AQ96GK7 314 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 CCDC90BQ9GZT6 254 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 HES4Q9HCC6 221 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 ISYNA1Q9NPH2 558 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 SETD2Q9BYW2 2564 aaPredicted RBP21.45■■□□□ 1.02
TRIM28-204ENST00000594806 C2CD3Q4AC94 2353 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 MAGEB3O15480 346 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 NXPH2O95156 264 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 ECDO95905 644 aaPredicted RBP21.44■■□□□ 1.02
TRIM28-204ENST00000594806 GMFBP60983 142 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 MED22Q15528 200 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 ZNF788Q6ZQV5 615 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 MS4A15Q8N5U1 240 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 SEH1LQ96EE3 360 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 CEP19Q96LK0 163 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 CCL13Q99616 98 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 SNTG1Q9NSN8 517 aa21.44■■□□□ 1.02
TRIM28-204ENST00000594806 TRAPPC2LH3BP13 241 aa21.43■■□□□ 1.02
TRIM28-204ENST00000594806 RPS11P62280 158 aaKnown RBP eCLIP21.43■■□□□ 1.02
TRIM28-204ENST00000594806 PDZK1IP1Q13113 114 aa21.43■■□□□ 1.02
TRIM28-204ENST00000594806 BTNL3Q6UXE8 466 aa21.43■■□□□ 1.02
TRIM28-204ENST00000594806 SLC25A26Q70HW3 274 aa21.43■■□□□ 1.02
TRIM28-204ENST00000594806 RAB40AQ8WXH6 277 aa21.43■■□□□ 1.02
TRIM28-204ENST00000594806 OR5M11Q96RB7 305 aa21.43■■□□□ 1.02
TRIM28-204ENST00000594806 RHOFQ9HBH0 211 aa21.43■■□□□ 1.02
TRIM28-204ENST00000594806 INSIG2Q9Y5U4 225 aa21.43■■□□□ 1.02
TRIM28-204ENST00000594806 LOC105371242A0A075B767 164 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 DVL1O14640 695 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 NDUFB3O43676 98 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 GPX5O75715 221 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 ALDOBP05062 364 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 LIPFP07098 398 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 HCKP08631 526 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 PSG2P11465 335 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 HOXB4P17483 251 aaPredicted RBP21.42■■□□□ 1.02
TRIM28-204ENST00000594806 MAPK3P27361 379 aaPredicted RBP21.42■■□□□ 1.02
TRIM28-204ENST00000594806 PPP3R1P63098 170 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 IL13RA1P78552 427 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 PAX2Q02962 417 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 LRRC10Q5BKY1 277 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 SAXO1Q8IYX7 474 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 ZSCAN4Q8NAM6 433 aaPredicted RBP21.42■■□□□ 1.02
TRIM28-204ENST00000594806 OR5T2Q8NGG2 359 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 MMP26Q9NRE1 261 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 MTCH1Q9NZJ7 389 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 CKLFQ9UBR5 152 aa21.42■■□□□ 1.02
TRIM28-204ENST00000594806 SIGLEC5O15389 551 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 AMY2BP19961 511 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 KISS1Q15726 138 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 TBCEQ15813 527 aaPredicted RBP21.41■■□□□ 1.02
TRIM28-204ENST00000594806 SDSLQ96GA7 329 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 DMRTB1Q96MA1 342 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 ZNF488Q96MN9 340 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 TMPRSS13Q9BYE2 586 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 C7orf69Q9H7B7 122 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 SEBOXQ9HB31 216 aaPredicted RBP21.41■■□□□ 1.02
TRIM28-204ENST00000594806 TMEM138Q9NPI0 162 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 TAS2R4Q9NYW5 299 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 ZNF222Q9UK12 451 aa21.41■■□□□ 1.02
TRIM28-204ENST00000594806 IGKV1D-17A0A075B6S4 117 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 IGHV2-70DA0A0C4DH43 119 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 KIR2DS1A0A191URI9 304 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 PNMA8CA0A1B0GUJ8 204 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 ZNF879B4DU55 563 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 ENSAO43768 121 aaKnown RBP21.4■■□□□ 1.02
TRIM28-204ENST00000594806 KNG1P01042 644 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 FAM157CP0CG43 387 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 GABRA2P47869 451 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 POU3F4P49335 361 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 FIP1L1Q6UN15 594 aaKnown RBP21.4■■□□□ 1.02
TRIM28-204ENST00000594806 UFD1Q92890 307 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 SLAMF9Q96A28 289 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 DACT3Q96B18 629 aaPredicted RBP21.4■■□□□ 1.02
TRIM28-204ENST00000594806 GAFA1Q96PS6 74 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 MRI1Q9BV20 369 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 NAV3Q8IVL0 2385 aa21.4■■□□□ 1.02
TRIM28-204ENST00000594806 NIPBLQ6KC79 2804 aaeCLIP21.4■■□□□ 1.023e-6■■□□□ 13.6
TRIM28-204ENST00000594806 TRBV5-7A0A0A0MS05 114 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 RFPL4AA6NLU0 287 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 RFPL4AL1F8VTS6 287 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 PLATP00750 562 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 PPIAL4GP0DN37 164 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 IGFBP3P17936 291 aaPredicted RBP21.39■■□□□ 1.01
TRIM28-204ENST00000594806 FSTP19883 344 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 PAX8Q06710 450 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 MLLT11Q13015 90 aaPredicted RBP21.39■■□□□ 1.01
TRIM28-204ENST00000594806 TPBGQ13641 420 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 DOC2BQ14184 412 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 ASPHD2Q6ICH7 369 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 ZNF561Q8N587 486 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 FAM216BQ8N7L0 139 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 OR13C5Q8NGS8 318 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 NUDT16L1Q9BRJ7 211 aaKnown RBP21.39■■□□□ 1.01
TRIM28-204ENST00000594806 SMURF1Q9HCE7 757 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 FOXJ3Q9UPW0 622 aa21.39■■□□□ 1.01
TRIM28-204ENST00000594806 SRD5A1P18405 259 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms