RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 PIGCQ92535 297 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 PTX4Q96A99 478 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 CMBLQ96DG6 245 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 PAPOLGQ9BWT3 736 aaKnown RBP11.34□□□□□ -0.59
VRK3-205ENST00000593919 A0A0A6YYH2 397 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 METTL21EPA6NDL7 271 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 A6NJ64 397 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 CD300LBA8K4G0 201 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 M0QYG6 137 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 ATXN7O15265 892 aaPredicted RBP11.34□□□□□ -0.59
VRK3-205ENST00000593919 IL5P05113 134 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 DNASE1P24855 282 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 OR3A4PP47883 348 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 CAPZA1P52907 286 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 TAS2R19P59542 299 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 CNN3Q15417 329 aaKnown RBP11.34□□□□□ -0.59
VRK3-205ENST00000593919 C3orf36Q3SXR2 165 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 CDH26Q8IXH8 852 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 CHST4Q8NCG5 386 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 OR5D18Q8NGL1 313 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 SLC25A40Q8TBP6 338 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 SPSB1Q96BD6 273 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 GPER1Q99527 375 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 USB1Q9BQ65 265 aaKnown RBP11.34□□□□□ -0.59
VRK3-205ENST00000593919 GPR160Q9UJ42 338 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 SCP2D1Q9UJQ7 156 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 ZNF850A8MQ14 1090 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 LILRA1O75019 489 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 RAB3DO95716 219 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 VSIG8P0DPA2 414 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 ASCL1P50553 236 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 PLCXD3Q63HM9 321 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 ZNF626Q68DY1 528 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 OR2T2Q6IF00 324 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 ANGPTL5Q86XS5 388 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 TMEM229BQ8NBD8 167 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 CSNK2A3Q8NEV1 391 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 OR2T35Q8NGX2 323 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 SCPEP1Q9HB40 452 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 CA10Q9NS85 328 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 COQ3Q9NZJ6 369 aa11.33□□□□□ -0.6
VRK3-205ENST00000593919 FAM90A27PA6NNH2 459 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 CYB5AP00167 134 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 UQCRFS1P47985 274 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
VRK3-205ENST00000593919 QRFPP83859 136 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 UNQ6126/PRO20091Q6UXV3 157 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 MOB3CQ70IA8 216 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 SLC36A1Q7Z2H8 476 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 FTMTQ8N4E7 242 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 MED30Q96HR3 178 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 BCL2L14Q9BZR8 327 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 TINAGL1Q9GZM7 467 aaPredicted RBP11.32□□□□□ -0.6
VRK3-205ENST00000593919 SLC23A1Q9UHI7 598 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 MRPS28Q9Y2Q9 187 aaKnown RBP11.32□□□□□ -0.6
VRK3-205ENST00000593919 NPTNQ9Y639 398 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 FAM230AA0A1W2PPH8 454 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 WIPF3A6NGB9 483 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 SNRPGP15A8MWD9 76 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 CST4P01036 141 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 AMY2AP04746 511 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 CSN2P05814 226 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 PRKACBP22694 351 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 MTCP1P56278 107 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 PRDX4Q13162 271 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 ZNF260Q3ZCT1 412 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 RAB12Q6IQ22 244 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 TRAPPC6BQ86SZ2 158 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 PNLDC1Q8NA58 520 aaKnown RBP11.32□□□□□ -0.6
VRK3-205ENST00000593919 KLF14Q8TD94 323 aaPredicted RBP11.32□□□□□ -0.6
VRK3-205ENST00000593919 SNAPC3Q92966 411 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 BORCS8Q96FH0 119 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 MARS2Q96GW9 593 aaKnown RBP11.32□□□□□ -0.6
VRK3-205ENST00000593919 TECTBQ96PL2 329 aa11.32□□□□□ -0.6
VRK3-205ENST00000593919 HCFC1P51610 2035 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 NKX2-6A6NCS4 301 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
VRK3-205ENST00000593919 RAB27BO00194 218 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 CRYAAP02489 173 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 THBDP07204 575 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 RAC2P15153 192 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 MPV17P39210 176 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 HTR2BP41595 481 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 PTGFRP43088 359 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 RBP2P50120 134 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 UBE2MP61081 183 aaKnown RBP11.31□□□□□ -0.6
VRK3-205ENST00000593919 TLE1Q04724 770 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 CDSNQ15517 529 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 IGFBP7Q16270 282 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 CDNFQ49AH0 187 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 RTN4RL2Q86UN3 420 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 WFDC8Q8IUA0 241 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 SPICQ8N5J4 248 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 UXS1Q8NBZ7 420 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 OR4S1Q8NGB4 309 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 NUDCD2Q8WVJ2 157 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 HPSE2Q8WWQ2 592 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms