RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 HMGN1P05114 100 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 EPHA2P29317 976 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 EFNB1P98172 346 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 ZNF684Q5T5D7 378 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 ZNF626Q68DY1 528 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 C11orf88Q6PI97 169 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 COMMD2Q86X83 199 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 PHF21AQ96BD5 680 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 CITED2Q99967 270 aaPredicted RBP8.58□□□□□ -1.04
USE1-203ENST00000593597 NPFFR1Q9GZQ6 430 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 FAM234AQ9H0X4 552 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 HEXA-AS1Q9H8Q6 139 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 TVP23BQ9NYZ1 205 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 OR14J1Q9UGF5 321 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 MRM2Q9UI43 246 aaKnown RBP8.58□□□□□ -1.04
USE1-203ENST00000593597 SLC22A13Q9Y226 551 aa8.58□□□□□ -1.04
USE1-203ENST00000593597 TMEM82A0PJX8 343 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 AQP12BA6NM10 295 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 H3BSH0 61 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 K7N7A8 449 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 SLC1A7O00341 560 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 ATP8B1O43520 1251 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 MITFO75030 526 aaPredicted RBP8.57□□□□□ -1.04
USE1-203ENST00000593597 ZNF254O75437 659 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 MMP23AO75900 390 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 NXPH2O95156 264 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 CALB2P22676 271 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 DAPP51397 102 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 MNAT1P51948 309 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 RIDAP52758 137 aaKnown RBP8.57□□□□□ -1.04
USE1-203ENST00000593597 CRISP1P54107 249 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 BLCAPP62952 87 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 COL10A1Q03692 680 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 SNAPC1Q16533 368 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 ZNF829Q3KNS6 432 aaPredicted RBP8.57□□□□□ -1.04
USE1-203ENST00000593597 CLVS2Q5SYC1 327 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 AADACL4Q5VUY2 407 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 FAHD1Q6P587 224 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 KCTD18Q6PI47 426 aaPredicted RBP8.57□□□□□ -1.04
USE1-203ENST00000593597 BAIAP2L2Q6UXY1 529 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 ASRGL1Q7L266 308 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 AQP12AQ8IXF9 295 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 ELMOD2Q8IZ81 293 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 OR11H6Q8NGC7 330 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
USE1-203ENST00000593597 MROQ9BYG7 248 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 ADGRL4Q9HBW9 690 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 RAB18Q9NP72 206 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 MTCH1Q9NZJ7 389 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 OR52A1Q9UKL2 312 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 R4GMQ9 66 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 TENM3Q9P273 2699 aa8.57□□□□□ -1.04
USE1-203ENST00000593597 TCRBV3S1A0A5B6 114 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 LOC110117498-PIK3R3F6TDL0 507 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 DLGAP1O14490 977 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 FKBP6O75344 327 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 ARG1P05089 322 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 IGHV1-8P0DP01 117 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 ANXA8P13928 327 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 CCL1P22362 96 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 CXCR4P61073 352 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 CBX1P83916 185 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 IL24Q13007 206 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 PTGES3Q15185 160 aaKnown RBP8.56□□□□□ -1.04
USE1-203ENST00000593597 CNN3Q15417 329 aaKnown RBP8.56□□□□□ -1.04
USE1-203ENST00000593597 UBE2V2Q15819 145 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 SSX2Q16385 188 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 TCTEX1D4Q5JR98 221 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 ZNF322Q6U7Q0 402 aaPredicted RBP8.56□□□□□ -1.04
USE1-203ENST00000593597 NDUFA11Q86Y39 141 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 ZNF573Q86YE8 665 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 SLC35F2Q8IXU6 374 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 TPRX1Q8N7U7 411 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 OR52N4Q8NGI2 321 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 TRMT10AQ8TBZ6 339 aaKnown RBP8.56□□□□□ -1.04
USE1-203ENST00000593597 MRAPQ8TCY5 172 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 ASB17Q8WXJ9 295 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 LRGUKQ96M69 825 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 OR5M11Q96RB7 305 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 CNN2Q99439 309 aaKnown RBP8.56□□□□□ -1.04
USE1-203ENST00000593597 OCSTAMPQ9BR26 566 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 THTPAQ9BU02 230 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 CADM1Q9BY67 442 aaKnown RBP8.56□□□□□ -1.04
USE1-203ENST00000593597 C1orf21Q9H246 121 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 IKZF2Q9UKS7 526 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 ZNF281Q9Y2X9 895 aa8.56□□□□□ -1.04
USE1-203ENST00000593597 TBL2Q9Y4P3 447 aaKnown RBP8.56□□□□□ -1.04
USE1-203ENST00000593597 GNGT2O14610 69 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 GSC2O15499 205 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 E2F6O75461 281 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 IGHA1P01876 353 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 ZNF728P0DKX0 622 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 UTF1Q5T230 341 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 BCL2L15Q5TBC7 163 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 LCN1P1Q5VSP4 162 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 FOXB2Q5VYV0 432 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 C12orf73Q69YU5 71 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 MEPCEQ7L2J0 689 aaKnown RBP8.55□□□□□ -1.04
USE1-203ENST00000593597 RNF144BQ7Z419 303 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms