RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SPENQ96T58 3664 aaKnown RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 APC2O95996 2303 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 A0A0B4J2E0 115 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 IGHV2-70DA0A0C4DH43 119 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 A0A1B0GX12 115 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 A0A1W2PRG6 482 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 GJE1A6NN92 205 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 C21orf140B9A014 251 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 DISC1C4P0D8 188 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 K7EN84 100 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 PSMD12O00232 456 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 EI24O14681 340 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 PHOX2AO14813 284 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 PFDN6O15212 129 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 KLRC4O43908 158 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 TRAPPC6AO75865 159 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 OR2B3O76000 313 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 MPZL1O95297 269 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 OXSR1O95747 527 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 HBE1P02100 147 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 CRHP06850 196 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 KCNE1P15382 129 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 CALML3P27482 149 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 NTSP30990 170 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 STC1P52823 247 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 MAPK14Q16539 360 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 VWA2Q5GFL6 755 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 SAXO2Q658L1 398 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 CCDC71Q8IV32 467 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 GPD1LQ8N335 351 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 NATD1Q8N6N6 113 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF740Q8NDX6 193 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 MRPS31Q92665 395 aaKnown RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 SMIM19Q96E16 107 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 OR2V2Q96R30 315 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 TSNAXQ99598 290 aaKnown RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 TMEM121Q9BTD3 319 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 ALX4Q9H161 411 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 BOLA2Q9H3K6 86 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 TMEM27Q9HBJ8 222 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 THUMPD1Q9NXG2 353 aaKnown RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF107Q9UII5 783 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 COPS3Q9UNS2 423 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 FARSAQ9Y285 508 aaKnown RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 SNX24Q9Y343 169 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 USP9YO00507 2555 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-216ENST00000593223 NLRC5Q86WI3 1866 aa3.75□□□□□ -1.81
SMAD4-216ENST00000593223 ZNFX1Q9P2E3 1918 aaKnown RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 NBEAL1Q6ZS30 2694 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 TRAV8-7A0A075B6U6 113 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 KIR2DL5BA0A0G2JN68 375 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 KIR2DL5BA0A0G2JPC4 375 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 KIR2DS1A0A191URI9 304 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 F5H768 121 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 H7C2Y5 167 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 KCNK1O00180 336 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 CRXO43186 299 aaPredicted RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 PPIHO43447 177 aaKnown RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 CXCL13O43927 109 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 SLC16A7O60669 478 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 AQP8O94778 261 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 SNAP29O95721 258 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 IGKV3-15P01624 115 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 APOC1P02654 83 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RLN2P04090 185 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 CD5P06127 495 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 SCGB1A1P11684 91 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 HSD17B1P14061 328 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 CSNK2A2P19784 350 aaPredicted RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 WARSP23381 471 aaKnown RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 PSMA1P25786 263 aaKnown RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 GDF1P27539 372 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 MPIP34949 423 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RFC3P40938 356 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 AP1S2P56377 157 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 ERVPABLB-1P60509 514 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RHOAP61586 193 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 PRKCDQ05655 676 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 ACACAQ13085 2346 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 KIR2DS1Q14954 304 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 DUSP7Q16829 419 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 CNPY1Q3B7I2 92 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 SPIN4Q56A73 249 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RALGAPA1Q6GYQ0 2036 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 DHRS4L2Q6PKH6 230 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 CYS1Q717R9 158 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 NRMQ8IXM6 262 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 KIR2DL5AQ8N109 375 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 OR2L13Q8N349 312 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 KIR3DL3Q8N743 410 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RELL2Q8NC24 303 aaPredicted RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 OR1M1Q8NGA1 313 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 OR52H1Q8NGJ2 320 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 OR1S2Q8NGQ3 325 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 OR1K1Q8NGR3 316 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 KIR2DL5BQ8NHK3 375 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RNASE11Q8TAA1 199 aaKnown RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 FBXO25Q8TCJ0 367 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 DOK4Q8TEW6 326 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 TESCQ96BS2 214 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms