RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 ADAT3Q96EY9 351 aaPredicted RBP12.48□□□□□ -0.41
ERCC1-213ENST00000592023 PELI1Q96FA3 418 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 BORCS8Q96FH0 119 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 DMRTB1Q96MA1 342 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 PKIBQ9C010 78 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 AMBNQ9NP70 447 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 C19orf12Q9NSK7 152 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 FAM118AQ9NWS6 357 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 FRRS1LQ9P0K9 344 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 MYRFQ9Y2G1 1151 aa12.48□□□□□ -0.41
ERCC1-213ENST00000592023 TRBV23-1A0A0A0MS06 115 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 SERPINA3P01011 423 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 ZNF20P17024 532 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 PRDX2P32119 198 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 TMEM244Q5VVB8 128 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 FDX2Q6P4F2 183 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 C16orf87Q6PH81 154 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 METAP1DQ6UB28 335 aaPredicted RBP12.47□□□□□ -0.41
ERCC1-213ENST00000592023 FIP1L1Q6UN15 594 aaKnown RBP12.47□□□□□ -0.41
ERCC1-213ENST00000592023 KCTD20Q7Z5Y7 419 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 PNKDQ8N490 385 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 OR10AC1Q8NH08 325 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 RHOXF1Q8NHV9 184 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 PP6455Q8WZ26 134 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 C10orf35Q96D05 121 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 MRPL48Q96GC5 212 aaKnown RBP12.47□□□□□ -0.41
ERCC1-213ENST00000592023 Q96MT0 163 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 CHIAQ9BZP6 476 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 HES4Q9HCC6 221 aa12.47□□□□□ -0.41
ERCC1-213ENST00000592023 SMPD3Q9NY59 655 aaPredicted RBP12.47□□□□□ -0.41
ERCC1-213ENST00000592023 M0R1W7 72 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 KNG1P01042 644 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 OMGP23515 440 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 EEF1B2P24534 225 aaKnown RBP12.46□□□□□ -0.41
ERCC1-213ENST00000592023 POU3F4P49335 361 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 FUT6P51993 359 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 ERVK11-1P61568 191 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 GUCA2AQ02747 115 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 BLMHQ13867 455 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 SLC25A26Q70HW3 274 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 ZNF555Q8NEP9 628 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 OR51A4Q8NGJ6 313 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 OR13C3Q8NGS6 347 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 APH1BQ8WW43 257 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 SSMEM1Q8WWF3 244 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 CEP19Q96LK0 163 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 METTL8Q9H825 291 aaKnown RBP12.46□□□□□ -0.41
ERCC1-213ENST00000592023 ISG20L2Q9H9L3 353 aaKnown RBP12.46□□□□□ -0.41
ERCC1-213ENST00000592023 MTCH1Q9NZJ7 389 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.46□□□□□ -0.41
ERCC1-213ENST00000592023 FAM96BQ9Y3D0 163 aa12.46□□□□□ -0.41
ERCC1-213ENST00000592023 FAM181BA6NEQ2 426 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 F8VVB4 439 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 F8VWA3 439 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 H0YAE9 185 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 NPFFO15130 113 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 FADS2O95864 444 aaKnown RBP12.45□□□□□ -0.42
ERCC1-213ENST00000592023 IGHV4-59P01825 116 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 IGHA1P01876 353 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 ISG15P05161 165 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 ATF1P18846 271 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 AZGP1P25311 298 aaKnown RBP12.45□□□□□ -0.42
ERCC1-213ENST00000592023 ALKBH1Q13686 389 aaKnown RBP12.45□□□□□ -0.42
ERCC1-213ENST00000592023 GALEQ14376 348 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 LRRC36Q1X8D7 754 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 NCR3LG1Q68D85 454 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 LDLRAD3Q86YD5 345 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 SYS1Q8N2H4 156 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 TMEM86BQ8N661 226 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 ZNF676Q8N7Q3 588 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 ASCC1Q8N9N2 400 aaKnown RBP12.45□□□□□ -0.42
ERCC1-213ENST00000592023 OR4M1Q8NGD0 313 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 OR52I1Q8NGK6 324 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 TNFRSF14Q92956 283 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 EMG1Q92979 244 aaKnown RBP12.45□□□□□ -0.42
ERCC1-213ENST00000592023 FGGYQ96C11 551 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 ERVK13-1Q9NX77 482 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 HHLA2Q9UM44 414 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 POMT1Q9Y6A1 747 aa12.45□□□□□ -0.42
ERCC1-213ENST00000592023 IGKV1-9A0A0C4DH69 117 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 OR4C45A6NMZ5 311 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 TK1P04183 234 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 CRYBA1P05813 215 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 FBP1P09467 338 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 OCM2P0CE71 109 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 OCMP0CE72 109 aaPredicted RBP12.44□□□□□ -0.42
ERCC1-213ENST00000592023 PIPP12273 146 aaPredicted RBP12.44□□□□□ -0.42
ERCC1-213ENST00000592023 MDKP21741 143 aaPredicted RBP12.44□□□□□ -0.42
ERCC1-213ENST00000592023 SAA4P35542 130 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 RBP2P50120 134 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 CCR9P51686 369 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 ATP1B3P54709 279 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 RPL31P62899 125 aaKnown RBP12.44□□□□□ -0.42
ERCC1-213ENST00000592023 COL10A1Q03692 680 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 RAB40BQ12829 278 aa12.44□□□□□ -0.42
ERCC1-213ENST00000592023 SMN1Q16637 294 aaKnown RBP12.44□□□□□ -0.42
ERCC1-213ENST00000592023 UTS2BQ765I0 119 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms