RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SMN1Q16637 294 aaKnown RBP22.42■■□□□ 1.18
SMAD4-213ENST00000591914 DEFB112Q30KQ8 113 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 ZNF691Q5VV52 312 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 CD177Q8N6Q3 437 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 GATAD2BQ8WXI9 593 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 LHX4Q969G2 390 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 DUX5Q96PT3 197 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 IGHV1-69DA0A0B4J2H0 117 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 MDFIC2A0A1B0GVS7 189 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 IGHV1-69P01742 117 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 COMPP49747 757 aaPredicted RBP22.41■■□□□ 1.18
SMAD4-213ENST00000591914 CNN3Q15417 329 aaKnown RBP22.41■■□□□ 1.18
SMAD4-213ENST00000591914 UTS2BQ765I0 119 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 VMO1Q7Z5L0 202 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 CMTM4Q8IZR5 234 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 DNAAF1Q8NEP3 725 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 TMEM185AQ8NFB2 350 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 OR10AC1Q8NH08 325 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 JAM3Q9BX67 310 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 HHLA2Q9UM44 414 aa22.41■■□□□ 1.18
SMAD4-213ENST00000591914 IGKV1-9A0A0C4DH69 117 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 CLIC3O95833 236 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 PRDX2P32119 198 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 SLC9A3R2Q15599 337 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 ZNF561Q8N587 486 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 Q8N7P7 452 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 OR51A4Q8NGJ6 313 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 GCDHQ92947 438 aaPredicted RBP22.4■■□□□ 1.18
SMAD4-213ENST00000591914 FGGYQ96C11 551 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 BORCS8Q96FH0 119 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 ELL3Q9HB65 397 aaPredicted RBP22.4■■□□□ 1.18
SMAD4-213ENST00000591914 FGF20Q9NP95 211 aaPredicted RBP22.4■■□□□ 1.18
SMAD4-213ENST00000591914 MTCH1Q9NZJ7 389 aa22.4■■□□□ 1.18
SMAD4-213ENST00000591914 RNASE1P07998 156 aaKnown RBP22.39■■□□□ 1.17
SMAD4-213ENST00000591914 ZNF20P17024 532 aa22.39■■□□□ 1.17
SMAD4-213ENST00000591914 MRPL28Q13084 256 aaKnown RBP22.39■■□□□ 1.17
SMAD4-213ENST00000591914 TTC23Q5W5X9 447 aa22.39■■□□□ 1.17
SMAD4-213ENST00000591914 METAP1DQ6UB28 335 aaPredicted RBP22.39■■□□□ 1.17
SMAD4-213ENST00000591914 C1orf122Q6ZSJ8 110 aa22.39■■□□□ 1.17
SMAD4-213ENST00000591914 BATF2Q8N1L9 274 aa22.39■■□□□ 1.17
SMAD4-213ENST00000591914 ZNF676Q8N7Q3 588 aa22.39■■□□□ 1.17
SMAD4-213ENST00000591914 CYGBQ8WWM9 190 aa22.39■■□□□ 1.17
SMAD4-213ENST00000591914 CEP19Q96LK0 163 aa22.39■■□□□ 1.17
SMAD4-213ENST00000591914 TRBV23-1A0A0A0MS06 115 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 ANKRD65E5RJM6 399 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 E9PI62 339 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 SLC1A7O00341 560 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 KNG1P01042 644 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 LIMS3P0CW19 117 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 LIMS4P0CW20 117 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 CEBPDP49716 269 aaPredicted RBP22.38■■□□□ 1.17
SMAD4-213ENST00000591914 RBP2P50120 134 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 ADARB1P78563 741 aaKnown RBP22.38■■□□□ 1.17
SMAD4-213ENST00000591914 C12orf54Q6X4T0 127 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 CNIH3Q8TBE1 160 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 SLC25A28Q96A46 364 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 NOX4Q9NPH5 578 aa22.38■■□□□ 1.17
SMAD4-213ENST00000591914 F8VVB4 439 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 F8VWA3 439 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 M0R1W7 72 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 CASQ2O14958 399 aaPredicted RBP22.37■■□□□ 1.17
SMAD4-213ENST00000591914 ATF1P18846 271 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 SLC25A26Q70HW3 274 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 DHRSXQ8N5I4 330 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 OR13C3Q8NGS6 347 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 HAVCR2Q8TDQ0 301 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 SLAMF9Q96A28 289 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 SIRT7Q9NRC8 400 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 FBN3Q75N90 2809 aa22.37■■□□□ 1.17
SMAD4-213ENST00000591914 A0A1W2PQ09 198 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 TMEM212A6NML5 194 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 ZFPL1O95159 310 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 RPSAP08865 295 aaKnown RBP22.36■■□□□ 1.17
SMAD4-213ENST00000591914 PRKACBP22694 351 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 AZGP1P25311 298 aaKnown RBP22.36■■□□□ 1.17
SMAD4-213ENST00000591914 CAPZA1P52907 286 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 GBX2P52951 348 aaPredicted RBP22.36■■□□□ 1.17
SMAD4-213ENST00000591914 ATP1B3P54709 279 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 OGFRL1Q5TC84 451 aaPredicted RBP22.36■■□□□ 1.17
SMAD4-213ENST00000591914 Q6YL49 198 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 SETD9Q8NE22 299 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 ZDHHC16Q969W1 377 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 SPSB1Q96BD6 273 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 UNKLQ9H9P5 680 aaKnown RBP22.36■■□□□ 1.17
SMAD4-213ENST00000591914 OR14J1Q9UGF5 321 aa22.36■■□□□ 1.17
SMAD4-213ENST00000591914 HOXA3O43365 443 aaPredicted RBP22.35■■□□□ 1.17
SMAD4-213ENST00000591914 CCDC159P0C7I6 412 aa22.35■■□□□ 1.17
SMAD4-213ENST00000591914 DCKP27707 260 aa22.35■■□□□ 1.17
SMAD4-213ENST00000591914 LHFPL2Q6ZUX7 228 aa22.35■■□□□ 1.17
SMAD4-213ENST00000591914 PDZD9Q8IXQ8 264 aa22.35■■□□□ 1.17
SMAD4-213ENST00000591914 PIP4P2Q8N4L2 257 aa22.35■■□□□ 1.17
SMAD4-213ENST00000591914 TNFRSF14Q92956 283 aa22.35■■□□□ 1.17
SMAD4-213ENST00000591914 C19orf12Q9NSK7 152 aa22.35■■□□□ 1.17
SMAD4-213ENST00000591914 RNASEK-C17orf49H0YIS7 233 aa22.34■■□□□ 1.17
SMAD4-213ENST00000591914 MT-ND2P03891 347 aa22.34■■□□□ 1.17
SMAD4-213ENST00000591914 HKR1P10072 659 aa22.34■■□□□ 1.17
SMAD4-213ENST00000591914 MTCP1P56278 107 aa22.34■■□□□ 1.17
SMAD4-213ENST00000591914 IL18R1Q13478 541 aa22.34■■□□□ 1.17
SMAD4-213ENST00000591914 OR5AK2Q8NH90 309 aa22.34■■□□□ 1.17
SMAD4-213ENST00000591914 OPALINQ96PE5 141 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms