RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	OR5AK2	Q8NH90	309 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	HAVCR2	Q8TDQ0	301 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	BORCS8	Q96FH0	119 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	WDFY2	Q96P53	400 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	PDCD1LG2	Q9BQ51	273 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	NRIP2	Q9BQI9	281 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	PCGF1	Q9BSM1	259 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	PKIB	Q9C010	78 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	COMMD4	Q9H0A8	199 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	CNTD2	Q9H8S5	307 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	SLC25A10	Q9UBX3	287 aa	Predicted RBP	7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	ZNF69	Q9UC07	566 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	ZNF222	Q9UK12	451 aa		7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	DIMT1	Q9UNQ2	313 aa	Known RBP	7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	CAB39	Q9Y376	341 aa	Predicted RBP	7.6	□□□□□ -1.19
DNMT1-223	ENST00000591239	TRAV40	A0A0B4J280	105 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	PLAT	P00750	562 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	CCDC159	P0C7I6	412 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	NDUFB7	P17568	137 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	ATF1	P18846	271 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	MYL12A	P19105	171 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	PRKACB	P22694	351 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	PRDX2	P32119	198 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	RBP2	P50120	134 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	GTF2A1	P52655	376 aa	Predicted RBP	7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	ATP1B3	P54709	279 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	MTCP1	P56278	107 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	CAV3	P56539	151 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	HILS1	P60008	231 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	ERVK11-1	P61568	191 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	ARF6	P62330	175 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	ST3GAL4	Q11206	333 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	CCDC58	Q4VC31	144 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	OR2G6	Q5TZ20	316 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	METTL11B	Q5VVY1	283 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	LAIR2	Q6ISS4	152 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	SLC25A26	Q70HW3	274 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	BCL6B	Q8N143	479 aa	Predicted RBP	7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	BATF2	Q8N1L9	274 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	SPATA3	Q8NHX4	192 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	FBLIM1	Q8WUP2	373 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	NRG4	Q8WWG1	115 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	H1FX	Q92522	213 aa	Known RBP	7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	TFAP2C	Q92754	450 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	GGH	Q92820	318 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	SDSL	Q96GA7	329 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	TMEM80	Q96HE8	168 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	DMRTB1	Q96MA1	342 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	JMJD8	Q96S16	334 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	DCTN5	Q9BTE1	182 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	C19orf24	Q9BVV8	132 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	MS4A7	Q9GZW8	240 aa	Predicted RBP	7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	HES4	Q9HCC6	221 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	CHCHD3	Q9NX63	227 aa	Known RBP	7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	MTCH1	Q9NZJ7	389 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	CLEC2D	Q9UHP7	191 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	EXOSC1	Q9Y3B2	195 aa	Known RBP	7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	MAB21L2	Q9Y586	359 aa		7.59	□□□□□ -1.19
DNMT1-223	ENST00000591239	EFCAB10	A6NFE3	127 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239		F8VVB4	439 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239		F8VWA3	439 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239		H0YJX3	145 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	SLC1A7	O00341	560 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	XPNPEP2	O43895	674 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	INMT	O95050	263 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	MT-ND2	P03891	347 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	OCM2	P0CE71	109 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	OCM	P0CE72	109 aa	Predicted RBP	7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	PIP	P12273	146 aa	Predicted RBP	7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	AZGP1	P25311	298 aa	Known RBP	7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	CEBPD	P49716	269 aa	Predicted RBP	7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	MED21	Q13503	144 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	GPR157	Q5UAW9	335 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	XAF1	Q6GPH4	301 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	RPL22L1	Q6P5R6	122 aa	Known RBP	7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	RBMS3	Q6XE24	437 aa	Known RBP	7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	LHFPL2	Q6ZUX7	228 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	C9orf139	Q6ZV77	190 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	SERPINA12	Q8IW75	414 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	ZNF561	Q8N587	486 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	CD177	Q8N6Q3	437 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	SIGLECL1	Q8N7X8	197 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	TMEM185A	Q8NFB2	350 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	BPIFB6	Q8NFQ5	453 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	OR5D14	Q8NGL3	314 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	OR13C9	Q8NGT0	318 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	C8orf46	Q8TAG6	207 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	ZFAND2B	Q8WV99	257 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	GATAD2B	Q8WXI9	593 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	SLAMF9	Q96A28	289 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	SPSB1	Q96BD6	273 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	CEP19	Q96LK0	163 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	TBX15	Q96SF7	602 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	SIRPD	Q9H106	197 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	ZCCHC4	Q9H5U6	513 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	ESM1	Q9NQ30	184 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	PLCXD1	Q9NUJ7	323 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	BABAM2	Q9NXR7	383 aa		7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	CNOT2	Q9NZN8	540 aa	Known RBP	7.58	□□□□□ -1.2
DNMT1-223	ENST00000591239	ONECUT1	Q9UBC0	465 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms