RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PLEKHA2Q9HB19 425 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 B3GALT5Q9Y2C3 310 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 LINC01565O15544 149 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 IFNA21P01568 189 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 ERGP11308 486 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 IGFBP3P17936 291 aaPredicted RBP13.35□□□□□ -0.27
CIRBP-228ENST00000590347 RAB38P57729 211 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 PHF19Q5T6S3 580 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 SLC18B1Q6NT16 456 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 RD3Q7Z3Z2 195 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 OR5L1Q8NGL2 311 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 OR1L6Q8NGR2 347 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 LRFN1Q9P244 771 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 C14orf166Q9Y224 244 aaKnown RBP13.35□□□□□ -0.27
CIRBP-228ENST00000590347 COA3Q9Y2R0 106 aaPredicted RBP13.35□□□□□ -0.27
CIRBP-228ENST00000590347 RRP8O43159 456 aaKnown RBP13.34□□□□□ -0.27
CIRBP-228ENST00000590347 TBPP20226 339 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 GZMHP20718 246 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 FPR2P25090 351 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 FHL5Q5TD97 284 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 LCN15Q6UWW0 184 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 ZNF100Q8IYN0 542 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 METTL21AQ8WXB1 218 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 GPER1Q99527 375 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 PCGF1Q9BSM1 259 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 MBNL1Q9NR56 388 aaKnown RBP13.34□□□□□ -0.27
CIRBP-228ENST00000590347 CACNA1DQ01668 2161 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 DIDO1Q9BTC0 2240 aaKnown RBP13.34□□□□□ -0.27
CIRBP-228ENST00000590347 LRRK1Q38SD2 2015 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 TRAV34A0A0B4J273 112 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 NUPR1O60356 82 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 TMEM127O75204 238 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 HPRT1P00492 218 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 HLA-HP01893 362 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 UCP2P55851 309 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 RBX1P62877 108 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 ARHGAP19Q14CB8 494 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 CD226Q15762 336 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 BRICD5Q6PL45 260 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 DCXRQ7Z4W1 244 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 TMEM256Q8N2U0 113 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 FAM160A2Q8N612 972 aaPredicted RBP13.34□□□□□ -0.27
CIRBP-228ENST00000590347 TUBG2Q9NRH3 451 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 SERINC1Q9NRX5 453 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 AURKAIP1Q9NWT8 199 aaPredicted RBP13.34□□□□□ -0.27
CIRBP-228ENST00000590347 FKBP11Q9NYL4 201 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 OR52A1Q9UKL2 312 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 DAPP1Q9UN19 280 aa13.34□□□□□ -0.27
CIRBP-228ENST00000590347 CLDN34H7C241 214 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 TP53I11O14683 189 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 LCATP04180 440 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 CD82P27701 267 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 MSX1P28360 303 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 EGR4Q05215 589 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 MGAT2Q10469 447 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 RAB35Q15286 201 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 SHHQ15465 462 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 DEGS2Q6QHC5 323 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 LINC00114Q6XXX2 140 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 Q7L0L9 218 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 OR10A7Q8NGE5 316 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 GPR119Q8TDV5 335 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 TAAR8Q969N4 342 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 LPAR5Q9H1C0 372 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 CALHM2Q9HA72 323 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 MMP25Q9NPA2 562 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 C1orf123Q9NWV4 160 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 TMEM14AQ9Y6G1 99 aa13.33□□□□□ -0.27
CIRBP-228ENST00000590347 HMGB3O15347 200 aaKnown RBP13.33□□□□□ -0.28
CIRBP-228ENST00000590347 CTSVO60911 334 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 NUDT14O95848 222 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 EPHA1P21709 976 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 TOMM20LQ6UXN7 152 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 FBXW12Q6X9E4 464 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 PEG10Q86TG7 708 aaKnown RBP13.33□□□□□ -0.28
CIRBP-228ENST00000590347 CATSPERDQ86XM0 798 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 SULF2Q8IWU5 870 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 PARD6GQ9BYG4 376 aaPredicted RBP13.33□□□□□ -0.28
CIRBP-228ENST00000590347 PLA2G2FQ9BZM2 168 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 NXT1Q9UKK6 140 aaKnown RBP13.33□□□□□ -0.28
CIRBP-228ENST00000590347 NSG1A0A0A6YYJ2 146 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 EPOPA6NHQ4 379 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 TK1P04183 234 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 CTSBP07858 339 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 OR5AC1P0C628 307 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 BRS3P32247 399 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 OPRM1P35372 400 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 RRADP55042 308 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 CD81P60033 236 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 CEBPEQ15744 281 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 CHRFAM7AQ494W8 412 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 C2orf27AQ580R0 203 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 OGFOD3Q6PK18 319 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 PRR22Q8IZ63 422 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 CMTM1Q8IZ96 169 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 IL22RA1Q8N6P7 574 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 EXTL1Q92935 676 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 ZNF665Q9H7R5 613 aa13.33□□□□□ -0.28
CIRBP-228ENST00000590347 PCNX3Q9H6A9 2034 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 GTF3C1Q12789 2109 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms