RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 HOXA4Q00056 320 aaPredicted RBP8.64□□□□□ -1.03
SDF2-208ENST00000589788 CDONQ4KMG0 1287 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 DMRTC1Q5HYR2 192 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 WDR38Q5JTN6 314 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 CLVS2Q5SYC1 327 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 XAF1Q6GPH4 301 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 LYPD2Q6UXB3 125 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 BTNL3Q6UXE8 466 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 KRT74Q7RTS7 529 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 LHFPL3Q86UP9 236 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 FAM90A1Q86YD7 464 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 SYS1Q8N2H4 156 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 CCDC54Q8NEL0 328 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 OR14K1Q8NGZ2 314 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 OR52N1Q8NH53 320 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 NANPQ8TBE9 248 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 TECTBQ96PL2 329 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 MRI1Q9BV20 369 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 MMP26Q9NRE1 261 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 DNAJB11Q9UBS4 358 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 FBLN5Q9UBX5 448 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 CLEC2DQ9UHP7 191 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 LSM2Q9Y333 95 aaKnown RBP8.64□□□□□ -1.03
SDF2-208ENST00000589788 CAB39Q9Y376 341 aaPredicted RBP8.64□□□□□ -1.03
SDF2-208ENST00000589788 V9GYS6 101 aa8.64□□□□□ -1.03
SDF2-208ENST00000589788 A6NIN4 97 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 NOTOA8MTQ0 251 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 TRAPPC2LH3BP13 241 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 ZNF12P17014 697 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 JUNBP17275 347 aaPredicted RBP8.63□□□□□ -1.03
SDF2-208ENST00000589788 CCL1P22362 96 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 NPY4RP50391 375 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 MECP2P51608 486 aaKnown RBP8.63□□□□□ -1.03
SDF2-208ENST00000589788 WNT4P56705 351 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 GMFBP60983 142 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 RPL11P62913 178 aaKnown RBP8.63□□□□□ -1.03
SDF2-208ENST00000589788 FAM76BQ5HYJ3 339 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 TMEM244Q5VVB8 128 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 UBE2UQ5VVX9 321 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 TEX36Q5VZQ5 186 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 WDR25Q64LD2 544 aaPredicted RBP8.63□□□□□ -1.03
SDF2-208ENST00000589788 HAGHLQ6PII5 290 aaPredicted RBP8.63□□□□□ -1.03
SDF2-208ENST00000589788 TMPRSS11AQ6ZMR5 421 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 LHFPL2Q6ZUX7 228 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 ZNF367Q7RTV3 350 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 C1QL2Q7Z5L3 287 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 PRSS35Q8N3Z0 413 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 ZNF485Q8NCK3 441 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 OR10Z1Q8NGY1 313 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 OR2G2Q8NGZ5 317 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 ZNF671Q8TAW3 534 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 C4orf36Q96KX1 117 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 FGF23Q9GZV9 251 aaPredicted RBP8.63□□□□□ -1.03
SDF2-208ENST00000589788 OR51I2Q9H344 312 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 GPR173Q9NS66 373 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 INSIG2Q9Y5U4 225 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 AUP1Q9Y679 476 aa8.63□□□□□ -1.03
SDF2-208ENST00000589788 ZFHX3Q15911 3703 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 IGHV2-70DA0A0C4DH43 119 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 LOC107986453A0A1B0GWG9 222 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 ANKRD61A6NGH8 418 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 NKX6-3A6NJ46 265 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 SRRM5B3KS81 715 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 AKR7A2O43488 359 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 SERPINA3P01011 423 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 TFAP2AP05549 437 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 ADRA2CP18825 462 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 FPR2P25090 351 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 KIR3DL2P43630 455 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 ACSM1Q08AH1 577 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 LSAMPQ13449 338 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 BLMHQ13867 455 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 SPHARQ15513 63 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 MED22Q15528 200 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 NEDD8Q15843 81 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 TMEM177Q53S58 311 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 ARMCX4Q5H9R4 360 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 SYT6Q5T7P8 510 aaPredicted RBP8.62□□□□□ -1.03
SDF2-208ENST00000589788 OR2G6Q5TZ20 316 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 CD276Q5ZPR3 534 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 TMEM42Q69YG0 159 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 Q6ZSR3 168 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 SLC36A1Q7Z2H8 476 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 ZNF573Q86YE8 665 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 RDH10Q8IZV5 341 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 HAVCR2Q8TDQ0 301 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 RAB40AQ8WXH6 277 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 MUL1Q969V5 352 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 C12orf43Q96C57 262 aaKnown RBP8.62□□□□□ -1.03
SDF2-208ENST00000589788 OR5M11Q96RB7 305 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 NUDT16L1Q9BRJ7 211 aaKnown RBP8.62□□□□□ -1.03
SDF2-208ENST00000589788 ISG20L2Q9H9L3 353 aaKnown RBP8.62□□□□□ -1.03
SDF2-208ENST00000589788 CTSZQ9UBR2 303 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 SLC7A11Q9UPY5 501 aa8.62□□□□□ -1.03
SDF2-208ENST00000589788 FAM230AA0A1W2PPH8 454 aa8.61□□□□□ -1.03
SDF2-208ENST00000589788 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.61□□□□□ -1.03
SDF2-208ENST00000589788 J3QT63 122 aa8.61□□□□□ -1.03
SDF2-208ENST00000589788 TNFRSF13BO14836 293 aaPredicted RBP8.61□□□□□ -1.03
SDF2-208ENST00000589788 ENSAO43768 121 aaKnown RBP8.61□□□□□ -1.03
SDF2-208ENST00000589788 RHBDL1O75783 438 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms